RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SH2D1AO60880 128 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 NDUFS6O75380 124 aaKnown RBP9.74□□□□□ -0.85
SP140-213ENST00000543928 CEBPGP53567 150 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 ZNF674Q2M3X9 581 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 CLLU1Q5K131 121 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 FAM162BQ5T6X4 162 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 C11orf72Q8NBR9 251 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 PARLQ9H300 379 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 SDF2L1Q9HCN8 221 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 GSN-AS1Q9NRJ2 163 aa9.74□□□□□ -0.85
SP140-213ENST00000543928 TRBV20OR9-2A0A075B6H5 130 aa9.73□□□□□ -0.85
SP140-213ENST00000543928 TRGV11A0A075B6L2 103 aa9.73□□□□□ -0.85
SP140-213ENST00000543928 GNRH2O43555 120 aa9.73□□□□□ -0.85
SP140-213ENST00000543928 IGLV2-8P01709 118 aa9.73□□□□□ -0.85
SP140-213ENST00000543928 TYMSP04818 313 aa9.73□□□□□ -0.85
SP140-213ENST00000543928 SRP19P09132 144 aaKnown RBP9.73□□□□□ -0.85
SP140-213ENST00000543928 SRSF3P84103 164 aaKnown RBP9.73□□□□□ -0.85
SP140-213ENST00000543928 IBA57Q5T440 356 aaKnown RBP9.73□□□□□ -0.85
SP140-213ENST00000543928 MUC7Q8TAX7 377 aa9.73□□□□□ -0.85
SP140-213ENST00000543928 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
SP140-213ENST00000543928 TIMM8BQ9Y5J9 83 aaPredicted RBP9.73□□□□□ -0.85
SP140-213ENST00000543928 IGKV3D-20A0A0C4DH25 116 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 TEX48A0A1B0GUV7 120 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 PGPEP1LA6NFU8 196 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 LYRM9A8MSI8 78 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 MGST1P10620 155 aaKnown RBP9.72□□□□□ -0.85
SP140-213ENST00000543928 TCL1AP56279 114 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 PEA15Q15121 130 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 PRR27Q6MZM9 219 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 SMIM12Q96EX1 92 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
SP140-213ENST00000543928 IGHV3-16A0A0C4DH30 117 aa9.71□□□□□ -0.86
SP140-213ENST00000543928 C9JCJ5 164 aa9.71□□□□□ -0.86
SP140-213ENST00000543928 C9JQL5 133 aa9.71□□□□□ -0.86
SP140-213ENST00000543928 M0R036 132 aa9.71□□□□□ -0.86
SP140-213ENST00000543928 ORM1P02763 201 aa9.71□□□□□ -0.86
SP140-213ENST00000543928 DAZ2Q13117 558 aaKnown RBP9.71□□□□□ -0.86
SP140-213ENST00000543928 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.86
SP140-213ENST00000543928 B4DEV8 164 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 DAD1P61803 113 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 ZFAND6Q6FIF0 208 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 Q6ZTC4 211 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 SMIM7Q9BQ49 75 aa9.7□□□□□ -0.86
SP140-213ENST00000543928 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
SP140-213ENST00000543928 Q6ZTI0 123 aa9.69□□□□□ -0.86
SP140-213ENST00000543928 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
SP140-213ENST00000543928 TMSB15BA0A087X1C1 80 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 GAGE12BA1L429 117 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 SPINK4O60575 86 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 GAGE7O76087 117 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 OR5I1Q13606 314 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 PHLDA1Q8WV24 401 aaPredicted RBP9.68□□□□□ -0.86
SP140-213ENST00000543928 SPXQ9BT56 116 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 BIN3Q9NQY0 253 aa9.68□□□□□ -0.86
SP140-213ENST00000543928 GRIFINA4D1Z8 144 aa9.67□□□□□ -0.86
SP140-213ENST00000543928 K7EN84 100 aa9.67□□□□□ -0.86
SP140-213ENST00000543928 S100A4P26447 101 aaKnown RBP9.67□□□□□ -0.86
SP140-213ENST00000543928 ASIPP42127 132 aa9.67□□□□□ -0.86
SP140-213ENST00000543928 RPL19P84098 196 aaKnown RBP9.67□□□□□ -0.86
SP140-213ENST00000543928 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
SP140-213ENST00000543928 MRPL16Q9NX20 251 aaKnown RBP9.67□□□□□ -0.86
SP140-213ENST00000543928 TRAV10A0A0B4J240 114 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 RNASE3P12724 160 aaKnown RBP9.66□□□□□ -0.86
SP140-213ENST00000543928 HTN3P15516 51 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 LGALS9BQ3B8N2 356 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 FAM74A3Q4VXF1 159 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 C9orf85Q96MD7 179 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 CSMD3Q7Z407 3707 aa9.66□□□□□ -0.86
SP140-213ENST00000543928 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
SP140-213ENST00000543928 TRGV2A0A075B6R0 118 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 DEFB131BA0A096LNP1 70 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 NUPR2A6NF83 97 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 H3BVH4 76 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 M0R2P5 195 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 LCE2BO14633 110 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 P01737 135 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 SOHLH1Q5JUK2 328 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 DNLZQ5SXM8 178 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 CASC10Q5T4H9 136 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 CEMP1Q6PRD7 247 aaPredicted RBP9.65□□□□□ -0.86
SP140-213ENST00000543928 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
SP140-213ENST00000543928 STARD9Q9P2P6 4700 aa9.65□□□□□ -0.87
SP140-213ENST00000543928 ATP5G1P05496 136 aa9.64□□□□□ -0.87
SP140-213ENST00000543928 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
SP140-213ENST00000543928 LINC01551Q86U37 167 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms