RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 DYNC2H1Q8NCM8 4307 aaKnown RBP10.7□□□□□ -0.7
CD9-210ENST00000543916 GNRH2O43555 120 aa10.7□□□□□ -0.7
CD9-210ENST00000543916 TYMSP04818 313 aa10.7□□□□□ -0.7
CD9-210ENST00000543916 TAGLN2P37802 199 aaKnown RBP10.7□□□□□ -0.7
CD9-210ENST00000543916 CRIP1P50238 77 aa10.7□□□□□ -0.7
CD9-210ENST00000543916 ZNF415Q09FC8 603 aa10.7□□□□□ -0.7
CD9-210ENST00000543916 LINC00612Q8N6U2 182 aa10.7□□□□□ -0.7
CD9-210ENST00000543916 TRGV11A0A075B6L2 103 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 GAGE12BA1L429 117 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 RBFOX3A6NFN3 312 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 GAGE7O76087 117 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 GAGE12FP0CL80 117 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 GAGE12GP0CL81 117 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 GAGE12IP0CL82 117 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 Q6ZTI0 123 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 MLST8Q9BVC4 326 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
CD9-210ENST00000543916 KLK5Q9Y337 293 aaPredicted RBP10.69□□□□□ -0.7
CD9-210ENST00000543916 IGHV3-16A0A0C4DH30 117 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 FABP5P3A8MUU1 101 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 SPINK4O60575 86 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 SH2D1AO60880 128 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 HTN3P15516 51 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 TOR2AQ5JU69 321 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 BAGE2Q86Y30 109 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 KCNS1Q96KK3 526 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 MED9Q9NWA0 146 aa10.68□□□□□ -0.7
CD9-210ENST00000543916 TRBV20OR9-2A0A075B6H5 130 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 TRGV1A0A0A0MS02 117 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 IGKV3D-20A0A0C4DH25 116 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 RAB19A4D1S5 217 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 ZNF674Q2M3X9 581 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 CENPWQ5EE01 88 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 FAM210AQ96ND0 272 aa10.67□□□□□ -0.7
CD9-210ENST00000543916 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
CD9-210ENST00000543916 PLECQ15149 4684 aaKnown RBP10.66□□□□□ -0.7
CD9-210ENST00000543916 IGLL5B9A064 214 aa10.66□□□□□ -0.7
CD9-210ENST00000543916 IGLV2-8P01709 118 aa10.66□□□□□ -0.7
CD9-210ENST00000543916 B4DEV8 164 aa10.65□□□□□ -0.7
CD9-210ENST00000543916 M0R036 132 aa10.65□□□□□ -0.7
CD9-210ENST00000543916 ORM1P02763 201 aa10.65□□□□□ -0.7
CD9-210ENST00000543916 ATP5G1P05496 136 aa10.65□□□□□ -0.7
CD9-210ENST00000543916 SPXQ9BT56 116 aa10.65□□□□□ -0.7
CD9-210ENST00000543916 EIF5A2Q9GZV4 153 aaKnown RBP10.65□□□□□ -0.7
CD9-210ENST00000543916 IGHV4-4A0A075B6R2 117 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 PGPEP1LA6NFU8 196 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 KRBOX1C9JBD0 128 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 TMEM250H0YL14 139 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 GNG4P50150 75 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 LGALS9BQ3B8N2 356 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 PRR27Q6MZM9 219 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 ZNF575Q86XF7 245 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 LYSTQ99698 3801 aa10.64□□□□□ -0.71
CD9-210ENST00000543916 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
CD9-210ENST00000543916 RNASE3P12724 160 aaKnown RBP10.63□□□□□ -0.71
CD9-210ENST00000543916 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
CD9-210ENST00000543916 C9orf85Q96MD7 179 aa10.63□□□□□ -0.71
CD9-210ENST00000543916 PARLQ9H300 379 aa10.63□□□□□ -0.71
CD9-210ENST00000543916 APLNQ9ULZ1 77 aa10.63□□□□□ -0.71
CD9-210ENST00000543916 KMT2CQ8NEZ4 4911 aaKnown RBP10.63□□□□□ -0.71
CD9-210ENST00000543916 TMSB15BA0A087X1C1 80 aa10.62□□□□□ -0.71
CD9-210ENST00000543916 GRIFINA4D1Z8 144 aa10.62□□□□□ -0.71
CD9-210ENST00000543916 F5H768 121 aa10.62□□□□□ -0.71
CD9-210ENST00000543916 MGST1P10620 155 aaKnown RBP10.62□□□□□ -0.71
CD9-210ENST00000543916 HOXA5P20719 270 aa10.62□□□□□ -0.71
CD9-210ENST00000543916 IFITM2Q01629 132 aa10.62□□□□□ -0.71
CD9-210ENST00000543916 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
CD9-210ENST00000543916 M0R2P5 195 aa10.61□□□□□ -0.71
CD9-210ENST00000543916 NDUFS6O75380 124 aaKnown RBP10.61□□□□□ -0.71
CD9-210ENST00000543916 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
CD9-210ENST00000543916 ASIPP42127 132 aa10.61□□□□□ -0.71
CD9-210ENST00000543916 CEBPGP53567 150 aa10.61□□□□□ -0.71
CD9-210ENST00000543916 RPL19P84098 196 aaKnown RBP10.61□□□□□ -0.71
CD9-210ENST00000543916 TMEM88Q6PEY1 159 aa10.61□□□□□ -0.71
CD9-210ENST00000543916 RASL10AQ92737 203 aa10.61□□□□□ -0.71
CD9-210ENST00000543916 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
CD9-210ENST00000543916 MUC4Q99102 2169 aa10.6□□□□□ -0.71
CD9-210ENST00000543916 C9JCJ5 164 aa10.6□□□□□ -0.71
CD9-210ENST00000543916 IGHV3-53P01767 116 aa10.6□□□□□ -0.71
CD9-210ENST00000543916 S100A4P26447 101 aaKnown RBP10.6□□□□□ -0.71
CD9-210ENST00000543916 TCTAP57738 103 aa10.6□□□□□ -0.71
CD9-210ENST00000543916 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
CD9-210ENST00000543916 DNLZQ5SXM8 178 aa10.6□□□□□ -0.71
CD9-210ENST00000543916 FAM210BQ96KR6 192 aa10.6□□□□□ -0.71
CD9-210ENST00000543916 LCE6AA0A183 80 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 C9JQL5 133 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 H3BVH4 76 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 OR5I1Q13606 314 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 POM121L12Q8N7R1 296 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 NDUFAF3Q9BU61 184 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 IL36BQ9NZH7 164 aa10.59□□□□□ -0.71
CD9-210ENST00000543916 K7EN84 100 aa10.58□□□□□ -0.72
CD9-210ENST00000543916 SFTA3P0C7M3 94 aa10.58□□□□□ -0.72
CD9-210ENST00000543916 ARMS2P0C7Q2 107 aa10.58□□□□□ -0.72
CD9-210ENST00000543916 ZNF876PQ49A33 203 aa10.58□□□□□ -0.72
CD9-210ENST00000543916 OCC1Q8TAD7 63 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms