RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TMEM183AQ8IXX5 376 aa12.64□□□□□ -0.39
TSFM-208ENST00000543727 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
TSFM-208ENST00000543727 C11orf52Q96A22 123 aa12.64□□□□□ -0.39
TSFM-208ENST00000543727 NAGKQ9UJ70 344 aa12.64□□□□□ -0.39
TSFM-208ENST00000543727 FABP5P3A8MUU1 101 aa12.63□□□□□ -0.39
TSFM-208ENST00000543727 PDE6DO43924 150 aa12.63□□□□□ -0.39
TSFM-208ENST00000543727 HTN3P15516 51 aa12.63□□□□□ -0.39
TSFM-208ENST00000543727 ALKAL2Q6UX46 152 aa12.63□□□□□ -0.39
TSFM-208ENST00000543727 TRGV2A0A075B6R0 118 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 SCO2A0A1W2PP80 73 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 GAGE12BA1L429 117 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 GAGE7O76087 117 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
TSFM-208ENST00000543727 CCL20P78556 96 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 MEF2BQ02080 365 aaPredicted RBP12.62□□□□□ -0.39
TSFM-208ENST00000543727 Q6ZTI0 123 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 LYSTQ99698 3801 aa12.62□□□□□ -0.39
TSFM-208ENST00000543727 KMT2CQ8NEZ4 4911 aaKnown RBP12.62□□□□□ -0.39
TSFM-208ENST00000543727 IGHV3-16A0A0C4DH30 117 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 F5H768 121 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 TYMSP04818 313 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 BCL2P10415 239 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 FAM162BQ5T6X4 162 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 LYPD6BQ8NI32 183 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 VAX2Q9UIW0 290 aa12.61□□□□□ -0.39
TSFM-208ENST00000543727 H3BNG1 76 aa12.6□□□□□ -0.39
TSFM-208ENST00000543727 LY6G6CO95867 125 aa12.6□□□□□ -0.39
TSFM-208ENST00000543727 TMEM88Q6PEY1 159 aa12.6□□□□□ -0.39
TSFM-208ENST00000543727 RASL10AQ92737 203 aa12.6□□□□□ -0.39
TSFM-208ENST00000543727 SMIM12Q96EX1 92 aa12.6□□□□□ -0.39
TSFM-208ENST00000543727 MUC4Q99102 2169 aa12.6□□□□□ -0.39
TSFM-208ENST00000543727 M0R2P5 195 aa12.59□□□□□ -0.39
TSFM-208ENST00000543727 P0DMU3 169 aa12.59□□□□□ -0.39
TSFM-208ENST00000543727 FAM231AP0DMU4 169 aa12.59□□□□□ -0.39
TSFM-208ENST00000543727 FAM231CP0DMU5 169 aa12.59□□□□□ -0.39
TSFM-208ENST00000543727 ZNF674Q2M3X9 581 aa12.59□□□□□ -0.39
TSFM-208ENST00000543727 ZC2HC1AQ96GY0 325 aa12.59□□□□□ -0.39
TSFM-208ENST00000543727 GNRH2O43555 120 aa12.58□□□□□ -0.4
TSFM-208ENST00000543727 MLST8Q9BVC4 326 aa12.58□□□□□ -0.4
TSFM-208ENST00000543727 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
TSFM-208ENST00000543727 BOLA1Q9Y3E2 137 aa12.58□□□□□ -0.4
TSFM-208ENST00000543727 DYNC2H1Q8NCM8 4307 aaKnown RBP12.57□□□□□ -0.4
TSFM-208ENST00000543727 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
TSFM-208ENST00000543727 SLAQ13239 276 aa12.57□□□□□ -0.4
TSFM-208ENST00000543727 BAGE2Q86Y30 109 aa12.57□□□□□ -0.4
TSFM-208ENST00000543727 PTH2Q96A98 100 aa12.57□□□□□ -0.4
TSFM-208ENST00000543727 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
TSFM-208ENST00000543727 SH2D1AO60880 128 aa12.56□□□□□ -0.4
TSFM-208ENST00000543727 NDUFS6O75380 124 aaKnown RBP12.56□□□□□ -0.4
TSFM-208ENST00000543727 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
TSFM-208ENST00000543727 DNLZQ5SXM8 178 aa12.56□□□□□ -0.4
TSFM-208ENST00000543727 C9orf85Q96MD7 179 aa12.56□□□□□ -0.4
TSFM-208ENST00000543727 B4DEV8 164 aa12.55□□□□□ -0.4
TSFM-208ENST00000543727 CIDEAO60543 219 aa12.55□□□□□ -0.4
TSFM-208ENST00000543727 ORM1P02763 201 aa12.55□□□□□ -0.4
TSFM-208ENST00000543727 ASIPP42127 132 aa12.55□□□□□ -0.4
TSFM-208ENST00000543727 LINC01559Q495D7 138 aa12.55□□□□□ -0.4
TSFM-208ENST00000543727 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
TSFM-208ENST00000543727 IGKV3D-20A0A0C4DH25 116 aa12.54□□□□□ -0.4
TSFM-208ENST00000543727 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
TSFM-208ENST00000543727 CRIP1P50238 77 aa12.54□□□□□ -0.4
TSFM-208ENST00000543727 OR5I1Q13606 314 aa12.54□□□□□ -0.4
TSFM-208ENST00000543727 RNF212Q495C1 297 aa12.54□□□□□ -0.4
TSFM-208ENST00000543727 IL36BQ9NZH7 164 aa12.54□□□□□ -0.4
TSFM-208ENST00000543727 KRBOX1C9JBD0 128 aa12.53□□□□□ -0.4
TSFM-208ENST00000543727 CXCL1P09341 107 aa12.53□□□□□ -0.4
TSFM-208ENST00000543727 RNASE3P12724 160 aaKnown RBP12.53□□□□□ -0.4
TSFM-208ENST00000543727 HOXA5P20719 270 aa12.53□□□□□ -0.4
TSFM-208ENST00000543727 FAM3BP58499 235 aaPredicted RBP12.53□□□□□ -0.4
TSFM-208ENST00000543727 TEX261Q6UWH6 196 aa12.53□□□□□ -0.4
TSFM-208ENST00000543727 BIN3Q9NQY0 253 aa12.53□□□□□ -0.4
TSFM-208ENST00000543727 NACAE9PAV3 2078 aa12.52□□□□□ -0.4
TSFM-208ENST00000543727 TRAV26-1A0A087WT03 109 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 RBFOX3A6NFN3 312 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 TMEM250H0YL14 139 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 GNG4P50150 75 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 CENPWQ5EE01 88 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 ZNF506Q5JVG8 444 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 DERL1Q9BUN8 251 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 MED9Q9NWA0 146 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 PRO0255Q9UI72 69 aa12.52□□□□□ -0.41
TSFM-208ENST00000543727 POM121L12Q8N7R1 296 aa12.51□□□□□ -0.41
TSFM-208ENST00000543727 NHLRC2Q8NBF2 726 aa12.51□□□□□ -0.41
TSFM-208ENST00000543727 ALMS1Q8TCU4 4167 aa12.51□□□□□ -0.41
TSFM-208ENST00000543727 MED14OSP0DP75 135 aa12.5□□□□□ -0.41
TSFM-208ENST00000543727 OR4C5Q8NGB2 326 aa12.5□□□□□ -0.41
TSFM-208ENST00000543727 TRGV4A0A0C4DH28 118 aa12.49□□□□□ -0.41
TSFM-208ENST00000543727 C9JCJ5 164 aa12.49□□□□□ -0.41
TSFM-208ENST00000543727 M0R036 132 aa12.49□□□□□ -0.41
TSFM-208ENST00000543727 NUDT3O95989 172 aa12.49□□□□□ -0.41
TSFM-208ENST00000543727 FHL2Q14192 279 aa12.49□□□□□ -0.41
TSFM-208ENST00000543727 UBE2DNLQ8IWF7 75 aa12.49□□□□□ -0.41
TSFM-208ENST00000543727 SYT8Q8NBV8 401 aa12.49□□□□□ -0.41
TSFM-208ENST00000543727 PLECQ15149 4684 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms