RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777	IQCF2	Q8IXL9	164 aa		10.91	□□□□□ -0.66
DDX11-222	ENST00000542777	C9orf62	Q8N4C0	152 aa		10.91	□□□□□ -0.66
DDX11-222	ENST00000542777	OR10G4	Q8NGN3	311 aa		10.91	□□□□□ -0.66
DDX11-222	ENST00000542777	SPX	Q9BT56	116 aa		10.91	□□□□□ -0.66
DDX11-222	ENST00000542777	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777		A0A0D9SG52	128 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	DIRC3	C9JPN6	131 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	GYPE	P15421	78 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	UBE2L3	P68036	154 aa	Known RBP	10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	TMEM183B	Q1AE95	376 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777		Q6AWC8	147 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	FAM159A	Q6UWV7	190 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	TMEM183A	Q8IXX5	376 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	OR2G3	Q8NGZ4	309 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	PCNP	Q8WW12	178 aa	Known RBP	10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	RASL10A	Q92737	203 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	PSMG3	Q9BT73	122 aa	Predicted RBP	10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	LENEP	Q9Y5L5	61 aa		10.9	□□□□□ -0.66
DDX11-222	ENST00000542777	TRGV11	A0A075B6L2	103 aa		10.89	□□□□□ -0.67
DDX11-222	ENST00000542777		A0A087WTM6	91 aa		10.89	□□□□□ -0.67
DDX11-222	ENST00000542777	TAAR5	O14804	337 aa		10.89	□□□□□ -0.67
DDX11-222	ENST00000542777	HMGB3	O15347	200 aa	Known RBP	10.89	□□□□□ -0.67
DDX11-222	ENST00000542777	DNAH10OS	P0CZ25	163 aa		10.89	□□□□□ -0.67
DDX11-222	ENST00000542777	XG	P55808	180 aa		10.89	□□□□□ -0.67
DDX11-222	ENST00000542777	WFDC10B	Q8IUB3	73 aa		10.89	□□□□□ -0.67
DDX11-222	ENST00000542777	MSRB1	Q9NZV6	116 aa		10.89	□□□□□ -0.67
DDX11-222	ENST00000542777		K7EP13	123 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	ORM1	P02763	201 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	EVI2A	P22794	236 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	ZNF726P1	Q15940	193 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	ZFP69	Q49AA0	526 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	KHDC3L	Q587J8	217 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	HYLS1	Q96M11	299 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	ZNF471	Q9BX82	626 aa	Predicted RBP	10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	BOLA1	Q9Y3E2	137 aa		10.88	□□□□□ -0.67
DDX11-222	ENST00000542777	KANTR	A0A1W2PQU2	76 aa		10.87	□□□□□ -0.67
DDX11-222	ENST00000542777	TAS2R45	P59539	299 aa		10.87	□□□□□ -0.67
DDX11-222	ENST00000542777	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.87	□□□□□ -0.67
DDX11-222	ENST00000542777	OR10G9	Q8NGN4	311 aa		10.87	□□□□□ -0.67
DDX11-222	ENST00000542777	OR10G7	Q8NGN6	311 aa		10.87	□□□□□ -0.67
DDX11-222	ENST00000542777	TXNDC17	Q9BRA2	123 aa		10.87	□□□□□ -0.67
DDX11-222	ENST00000542777	NAGK	Q9UJ70	344 aa		10.87	□□□□□ -0.67
DDX11-222	ENST00000542777	TRAV4	A0A0B4J268	109 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	PGP	A6NDG6	321 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777		C9JCJ5	164 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	GNRH2	O43555	120 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	PFDN1	O60925	122 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	KRTAP10-1	P60331	282 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	OR4C5	Q8NGB2	326 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	TMED6	Q8WW62	240 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	OTOR	Q9NRC9	128 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777	RPH3AL	Q9UNE2	315 aa		10.86	□□□□□ -0.67
DDX11-222	ENST00000542777		M0R2P5	195 aa		10.85	□□□□□ -0.67
DDX11-222	ENST00000542777	INAFM2	P0DMQ5	153 aa		10.85	□□□□□ -0.67
DDX11-222	ENST00000542777	TDRG1	Q3Y452	100 aa		10.85	□□□□□ -0.67
DDX11-222	ENST00000542777	CMTM2	Q8TAZ6	248 aa		10.85	□□□□□ -0.67
DDX11-222	ENST00000542777	CRYGD	P07320	174 aa		10.84	□□□□□ -0.67
DDX11-222	ENST00000542777	CDC34	P49427	236 aa	Predicted RBP	10.84	□□□□□ -0.67
DDX11-222	ENST00000542777	FHIT	P49789	147 aa		10.84	□□□□□ -0.67
DDX11-222	ENST00000542777	SERF2	P84101	59 aa		10.84	□□□□□ -0.67
DDX11-222	ENST00000542777	FAM74A1	Q5RGS3	127 aa		10.84	□□□□□ -0.67
DDX11-222	ENST00000542777	RAB24	Q969Q5	203 aa		10.84	□□□□□ -0.67
DDX11-222	ENST00000542777	TRAV21	A0A0B4J279	112 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777	IGHV3-16	A0A0C4DH30	117 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777	LOC100131303	A0A0U1RQF7	123 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777	GOLT1A	Q6ZVE7	132 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777	C10orf126	Q8N4M7	172 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777	STOML3	Q8TAV4	291 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777	FRZB	Q92765	325 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777	FAT1	Q14517	4588 aa		10.83	□□□□□ -0.68
DDX11-222	ENST00000542777		F6UZH7	168 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777	TYMS	P04818	313 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777	ARL14EPL	P0DKL9	152 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777	GCSH	P23434	173 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777		Q5VSD8	79 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777	SH2D6	Q7Z4S9	175 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777	TVP23C	Q96ET8	276 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777	TREM1	Q9NP99	234 aa		10.82	□□□□□ -0.68
DDX11-222	ENST00000542777		A0A1W2PPV4	95 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	SEC11B	P0C7V7	166 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	STAG3L2	P0CL84	134 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	STAG3L3	P0CL85	134 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	TPT1	P13693	172 aa	Known RBP	10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	GATA1	P15976	413 aa	Predicted RBP	10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	PQLC2	Q6ZP29	291 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	ARL6IP6	Q8N6S5	226 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	NHLRC2	Q8NBF2	726 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	KCNS1	Q96KK3	526 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	SDF2L1	Q9HCN8	221 aa		10.81	□□□□□ -0.68
DDX11-222	ENST00000542777	TRAV8-1	A0A0A6YYK1	113 aa		10.8	□□□□□ -0.68
DDX11-222	ENST00000542777	IGHV3-38	A0A0C4DH36	116 aa		10.8	□□□□□ -0.68
DDX11-222	ENST00000542777	PPT1	P50897	306 aa		10.8	□□□□□ -0.68
DDX11-222	ENST00000542777	FGF8	P55075	233 aa	Predicted RBP	10.8	□□□□□ -0.68
DDX11-222	ENST00000542777	TIRAP	P58753	221 aa		10.8	□□□□□ -0.68
DDX11-222	ENST00000542777	AKR1C8P	Q5T2L2	129 aa		10.8	□□□□□ -0.68
DDX11-222	ENST00000542777	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.8	□□□□□ -0.68
DDX11-222	ENST00000542777	CTXND1	A0A1B0GTU2	59 aa		10.79	□□□□□ -0.68
DDX11-222	ENST00000542777	PSCA	O43653	123 aa		10.79	□□□□□ -0.68
DDX11-222	ENST00000542777	MB	P02144	154 aa		10.79	□□□□□ -0.68
DDX11-222	ENST00000542777	SMR3B	P02814	79 aa	Predicted RBP	10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms