RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 OR4C5Q8NGB2 326 aa13.39□□□□□ -0.27
DDX11-220ENST00000542244 M0R2P5 195 aa13.38□□□□□ -0.27
DDX11-220ENST00000542244 TMEM75Q8N9X5 138 aa13.38□□□□□ -0.27
DDX11-220ENST00000542244 CMTM2Q8TAZ6 248 aa13.38□□□□□ -0.27
DDX11-220ENST00000542244 TREM1Q9NP99 234 aa13.38□□□□□ -0.27
DDX11-220ENST00000542244 GATA1P15976 413 aaPredicted RBP13.37□□□□□ -0.27
DDX11-220ENST00000542244 ACOT6Q3I5F7 207 aaPredicted RBP13.37□□□□□ -0.27
DDX11-220ENST00000542244 OR10G9Q8NGN4 311 aa13.37□□□□□ -0.27
DDX11-220ENST00000542244 OR10G7Q8NGN6 311 aa13.37□□□□□ -0.27
DDX11-220ENST00000542244 PCNPQ8WW12 178 aaKnown RBP13.37□□□□□ -0.27
DDX11-220ENST00000542244 PTTG2Q9NZH5 202 aa13.37□□□□□ -0.27
DDX11-220ENST00000542244 HERC1Q15751 4861 aa13.37□□□□□ -0.27
DDX11-220ENST00000542244 TRAV21A0A0B4J279 112 aa13.36□□□□□ -0.27
DDX11-220ENST00000542244 EPM2AB3EWF7 344 aa13.36□□□□□ -0.27
DDX11-220ENST00000542244 ORM1P02763 201 aa13.36□□□□□ -0.27
DDX11-220ENST00000542244 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
DDX11-220ENST00000542244 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
DDX11-220ENST00000542244 A0A1W2PPV4 95 aa13.35□□□□□ -0.27
DDX11-220ENST00000542244 C9JCJ5 164 aa13.35□□□□□ -0.27
DDX11-220ENST00000542244 CRYGDP07320 174 aa13.35□□□□□ -0.27
DDX11-220ENST00000542244 PQLC2Q6ZP29 291 aa13.35□□□□□ -0.27
DDX11-220ENST00000542244 NFE4Q86UQ8 179 aa13.35□□□□□ -0.27
DDX11-220ENST00000542244 EREGO14944 169 aa13.34□□□□□ -0.27
DDX11-220ENST00000542244 IGLV2-11P01706 119 aa13.34□□□□□ -0.27
DDX11-220ENST00000542244 SMR3BP02814 79 aaPredicted RBP13.34□□□□□ -0.27
DDX11-220ENST00000542244 PET100P0DJ07 73 aa13.34□□□□□ -0.27
DDX11-220ENST00000542244 EVI2AP22794 236 aa13.34□□□□□ -0.27
DDX11-220ENST00000542244 HSD17B11Q8NBQ5 300 aa13.34□□□□□ -0.27
DDX11-220ENST00000542244 SDF2L1Q9HCN8 221 aa13.34□□□□□ -0.27
DDX11-220ENST00000542244 ALG5Q9Y673 324 aa13.34□□□□□ -0.27
DDX11-220ENST00000542244 TRAV9-2A0A087WT02 112 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 Q5BKY6 102 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 CDPF1Q6NVV7 123 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 Q8N3U1 123 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 SLC25A29Q8N8R3 303 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 NHLRC2Q8NBF2 726 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 ASB13Q8WXK3 278 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 TXNDC17Q9BRA2 123 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 VPS13BQ7Z7G8 4022 aa13.33□□□□□ -0.28
DDX11-220ENST00000542244 LRCOL1A6NCL2 159 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 PGPEP1LA6NFU8 196 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 RS1O15537 224 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 STAG3L2P0CL84 134 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 STAG3L3P0CL85 134 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 FAM74A1Q5RGS3 127 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 Q6ZSN1 163 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 RAB24Q969Q5 203 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 SH3BGRL3Q9H299 93 aa13.32□□□□□ -0.28
DDX11-220ENST00000542244 GGTLC3B5MD39 225 aa13.31□□□□□ -0.28
DDX11-220ENST00000542244 TCRAP04437 139 aa13.31□□□□□ -0.28
DDX11-220ENST00000542244 GCHFRP30047 84 aa13.31□□□□□ -0.28
DDX11-220ENST00000542244 CDC34P49427 236 aaPredicted RBP13.31□□□□□ -0.28
DDX11-220ENST00000542244 ZNF876PQ49A33 203 aa13.31□□□□□ -0.28
DDX11-220ENST00000542244 Q5VSD8 79 aa13.31□□□□□ -0.28
DDX11-220ENST00000542244 SUN5Q8TC36 379 aa13.31□□□□□ -0.28
DDX11-220ENST00000542244 PSG8Q9UQ74 426 aa13.31□□□□□ -0.28
DDX11-220ENST00000542244 INAFM2P0DMQ5 153 aa13.3□□□□□ -0.28
DDX11-220ENST00000542244 ATP6V0CP27449 155 aa13.3□□□□□ -0.28
DDX11-220ENST00000542244 ARL6IP6Q8N6S5 226 aa13.3□□□□□ -0.28
DDX11-220ENST00000542244 LINC00479Q96M42 142 aa13.3□□□□□ -0.28
DDX11-220ENST00000542244 C9orf85Q96MD7 179 aa13.3□□□□□ -0.28
DDX11-220ENST00000542244 Q9UF83 564 aa13.3□□□□□ -0.28
DDX11-220ENST00000542244 IGHV3-38A0A0C4DH36 116 aa13.29□□□□□ -0.28
DDX11-220ENST00000542244 FBLL1A6NHQ2 334 aaKnown RBP13.29□□□□□ -0.28
DDX11-220ENST00000542244 GCGP01275 180 aa13.29□□□□□ -0.28
DDX11-220ENST00000542244 RNASE3P12724 160 aaKnown RBP13.29□□□□□ -0.28
DDX11-220ENST00000542244 GCSHP23434 173 aa13.29□□□□□ -0.28
DDX11-220ENST00000542244 PPT1P50897 306 aa13.29□□□□□ -0.28
DDX11-220ENST00000542244 DEFA1P59665 94 aa13.29□□□□□ -0.28
DDX11-220ENST00000542244 DEFA3P59666 94 aa13.29□□□□□ -0.28
DDX11-220ENST00000542244 Q9HAA7 133 aa13.29□□□□□ -0.28
DDX11-220ENST00000542244 IGHV3-30P01768 117 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 IGHV3-33P01772 117 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 IGHV3-30-3P0DP02 117 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 IGHV3-30-5P0DP03 117 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 TIRAPP58753 221 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 SUMO1P63165 101 aaKnown RBP13.28□□□□□ -0.28
DDX11-220ENST00000542244 ZNF506Q5JVG8 444 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 PRNTQ86SH4 94 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 C5orf17Q8NAS9 161 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 OR2G3Q8NGZ4 309 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
DDX11-220ENST00000542244 DNAH8Q96JB1 4490 aa13.27□□□□□ -0.28
DDX11-220ENST00000542244 TRAV34A0A0B4J273 112 aa13.27□□□□□ -0.29
DDX11-220ENST00000542244 IBA57-AS1B1ANH7 110 aa13.27□□□□□ -0.29
DDX11-220ENST00000542244 WFDC2Q14508 124 aa13.27□□□□□ -0.29
DDX11-220ENST00000542244 LINC01556Q5JQF7 62 aa13.27□□□□□ -0.29
DDX11-220ENST00000542244 EPDR1Q9UM22 224 aa13.27□□□□□ -0.29
DDX11-220ENST00000542244 FLI1Q01543 452 aaPredicted RBP13.26□□□□□ -0.29
DDX11-220ENST00000542244 ZNF726P1Q15940 193 aa13.26□□□□□ -0.29
DDX11-220ENST00000542244 AQP10Q96PS8 301 aa13.26□□□□□ -0.29
DDX11-220ENST00000542244 JPT2Q9H910 190 aa13.26□□□□□ -0.29
DDX11-220ENST00000542244 FAM30AQ9NZY2 134 aa13.26□□□□□ -0.29
DDX11-220ENST00000542244 IGKV3D-20A0A0C4DH25 116 aa13.25□□□□□ -0.29
DDX11-220ENST00000542244 K7EP13 123 aa13.25□□□□□ -0.29
DDX11-220ENST00000542244 PFN1P07737 140 aaKnown RBP13.25□□□□□ -0.29
DDX11-220ENST00000542244 OR10J3Q5JRS4 329 aa13.25□□□□□ -0.29
DDX11-220ENST00000542244 NDFIP1Q9BT67 221 aa13.25□□□□□ -0.29
DDX11-220ENST00000542244 PSMG3Q9BT73 122 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms