RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-215	ENST00000542133	PPP1CC	P36873	323 aa	Known RBP	5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SYNJ2BP	P57105	145 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	HBG1	P69891	147 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	HBG2	P69892	147 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133		Q0VG73	95 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	FOXI1	Q12951	378 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ZNF506	Q5JVG8	444 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRPT1	Q86TN4	253 aa	Known RBP	5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	LHFPL1	Q86WI0	220 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ANKRD29	Q8N6D5	301 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	CST11	Q9H112	138 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PARL	Q9H300	379 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ZNF331	Q9NQX6	463 aa	Predicted RBP	5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	CACFD1	Q9UGQ2	172 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PAM16	Q9Y3D7	125 aa		5.69	□□□□□ -1.5
NPIPB4-215	ENST00000542133		A0A0G2JND7	137 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133		F8W1H4	67 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ISLR	O14498	428 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	IGLC2	P0DOY2	106 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	IGLC3	P0DOY3	106 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PFN2	P35080	140 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ATP5G3	P48201	142 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ZNF137P	P52743	207 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133		Q75L30	129 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	GVQW1	Q8N7I0	195 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	OR10J6P	Q8NGY7	276 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TVP23B	Q9NYZ1	205 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133		R4GMQ9	66 aa		5.68	□□□□□ -1.5
NPIPB4-215	ENST00000542133	MYCBP2	O75592	4640 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRBV19	A0A075B6N1	114 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRAV8-4	A0A0B4J246	113 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRDV1	A0A1B0GX56	115 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	KNCN	A6PVL3	124 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SLC17A2	O00624	439 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	CDK2AP2	O75956	126 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SFT2D2	O95562	160 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	EGR2	P11161	476 aa	Predicted RBP	5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TMEM258	P61165	79 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	CDK5R1	Q15078	307 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	LCE1D	Q5T752	114 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	GFI1B	Q5VTD9	330 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133		Q6ZN92	141 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ATOH7	Q8N100	152 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ZFP41	Q8N8Y5	198 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	OR11H7	Q8NGC8	314 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	IL1F10	Q8WWZ1	152 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	RITA1	Q96K30	269 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	CARD19	Q96LW7	228 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	MRPL20	Q9BYC9	149 aa	Known RBP	5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	WASHC3	Q9Y3C0	194 aa		5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.67	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRAV8-2	A0A0B4J237	113 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRAV4	A0A0B4J268	109 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	IGKV1-9	A0A0C4DH69	117 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	OR2T8	A6NH00	312 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TMEM250	H0YL14	139 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133		H7C1H1	209 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133		M0R1X1	148 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SDCBP	O00560	298 aa	Predicted RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	AGPAT2	O15120	278 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PLA2G10	O15496	165 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	YPEL1	O60688	119 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PGLYRP1	O75594	196 aa	Predicted RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	NDUFA3	O95167	84 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRGV3	P03979	118 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PRSS3	P35030	304 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	POLR2I	P36954	125 aa	Known RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	HERVK_113	P63121	156 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	DAZ2	Q13117	558 aa	Known RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ADIRF	Q15847	76 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	RRN3P1	Q2M238	152 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	DEFB135	Q30KP9	77 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	AADACL3	Q5VUY0	350 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PVRIG	Q6DKI7	326 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SCGB1D4	Q6XE38	83 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TMEM179B	Q7Z7N9	219 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	DAZ4	Q86SG3	579 aa	Known RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133		Q8N1X5	172 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	OR4A5	Q8NH83	315 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	YPEL2	Q96QA6	119 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SMDT1	Q9H4I9	107 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	ST20	Q9HBF5	79 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	DAZ1	Q9NQZ3	744 aa	Known RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	DAZ3	Q9NR90	486 aa	Known RBP	5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	PYGO1	Q9Y3Y4	419 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133		U3KQE9	123 aa		5.66	□□□□□ -1.5
NPIPB4-215	ENST00000542133	IGHV3-43	A0A0B4J1X8	118 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TMEM235	A6NFC5	223 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	FCN1	O00602	326 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	LYRM1	O43325	122 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	TRBV12-3	P01733	135 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	IGHV3-43D	P0DP04	118 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	HMGA2	P52926	109 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	FOXA3	P55318	350 aa	Predicted RBP	5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	SEC11A	P67812	179 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	VMA21	Q3ZAQ7	101 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133		Q6ZWC4	215 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	NPB	Q8NG41	125 aa		5.65	□□□□□ -1.5
NPIPB4-215	ENST00000542133	OR2T35	Q8NGX2	323 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms