RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 GLMPQ8WWB7 406 aa5.21□□□□□ -1.58
NKRF-204ENST00000542113 USMG5Q96IX5 58 aa5.21□□□□□ -1.58
NKRF-204ENST00000542113 TM2D2Q9BX73 214 aa5.21□□□□□ -1.58
NKRF-204ENST00000542113 UBTD1Q9HAC8 227 aa5.21□□□□□ -1.58
NKRF-204ENST00000542113 LINC01619G3V211 115 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 H7C1H1 209 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 S100A4P26447 101 aaKnown RBP5.2□□□□□ -1.58
NKRF-204ENST00000542113 PPIFP30405 207 aaKnown RBP5.2□□□□□ -1.58
NKRF-204ENST00000542113 ARL3P36405 182 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 TCTAP57738 103 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 DPH3P1Q9H4G8 78 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 SELENOKQ9Y6D0 94 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 TRBV25-1A0A075B6N4 114 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 IGHV3-66A0A0C4DH42 116 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 F8VRH5 84 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 G3V318 75 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 TRGV3P03979 118 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 CEND1Q8N111 149 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 RAB37Q96AX2 223 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 TMEM160Q9NX00 188 aa5.2□□□□□ -1.58
NKRF-204ENST00000542113 H3BVH4 76 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 ZNF207O43670 478 aaKnown RBP5.19□□□□□ -1.58
NKRF-204ENST00000542113 LMO4P61968 165 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 ITLN2Q8WWU7 325 aaPredicted RBP5.19□□□□□ -1.58
NKRF-204ENST00000542113 JMJD8Q96S16 334 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 C11orf21Q9P2W6 132 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 OR11H12B2RN74 326 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 GTSCR1Q86UQ5 136 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 OR11H1Q8NG94 326 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 OR11H2Q8NH07 326 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 AJUBAQ96IF1 538 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 MRPL35Q9NZE8 188 aaKnown RBP5.19□□□□□ -1.58
NKRF-204ENST00000542113 PHLDA3Q9Y5J5 127 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 CRYBG3Q68DQ2 2970 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 CREBBPQ92793 2442 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 PTPRQQ9UMZ3 2332 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 TRAV40A0A0B4J280 105 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 J3QR89 54 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 GATA1P15976 413 aaPredicted RBP5.19□□□□□ -1.58
NKRF-204ENST00000542113 SUMO2P61956 95 aaKnown RBP5.19□□□□□ -1.58
NKRF-204ENST00000542113 FOXE3Q13461 319 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 CDSNQ15517 529 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 BPESC1Q9GZL8 116 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 MEGF9Q9H1U4 602 aa5.19□□□□□ -1.58
NKRF-204ENST00000542113 IGHV3OR16-13A0A075B7E8 117 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 IGHV3-74A0A0B4J1X5 117 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 C19orf54Q5BKX5 351 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 PAPPA-AS1Q5QFB9 102 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 SCGB3A1Q96QR1 104 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 IGKV2D-26A0A0A0MRZ7 120 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 IGF1P05019 195 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 FXYD2P54710 66 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 NEGR1Q7Z3B1 354 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 TOMM6Q96B49 74 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 CHTOPQ9Y3Y2 248 aaKnown RBP5.18□□□□□ -1.58
NKRF-204ENST00000542113 IGHV3-49A0A0A0MS15 119 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 IGHV1-69DA0A0B4J2H0 117 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 TMEM238LA0A1B0GVL6 79 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 A6NJY4 79 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 GAS8-AS1O95177 125 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 IGHV1-69P01742 117 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 RPL32P62910 135 aaKnown RBP5.18□□□□□ -1.58
NKRF-204ENST00000542113 NHP2Q9NX24 153 aaKnown RBP5.18□□□□□ -1.58
NKRF-204ENST00000542113 RAXQ9Y2V3 346 aa5.18□□□□□ -1.58
NKRF-204ENST00000542113 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.17□□□□□ -1.582e-6■■■□□ 19
NKRF-204ENST00000542113 G3V4G9 280 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 APRG1Q8IVJ8 170 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 HIST1H4GQ99525 98 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 SPOCK3Q9BQ16 436 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 PIMREGQ9BSJ6 248 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 ID1P41134 155 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 SCGB2A2Q13296 93 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 ZFAND2AQ8N6M9 145 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 CSTL1Q9H114 145 aa5.17□□□□□ -1.58
NKRF-204ENST00000542113 TRAV26-2A0A0B4J265 109 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 HERVK_113P61574 105 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 TM4SF20Q53R12 229 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 ZNF479Q96JC4 524 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 NOTCH3Q9UM47 2321 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 MYMXA0A1B0GTQ4 84 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 F8W1H4 67 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 NDUFS8O00217 210 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 SOCS3O14543 225 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 LYRM7Q5U5X0 104 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 HRNRQ86YZ3 2850 aaPredicted RBP5.16□□□□□ -1.58
NKRF-204ENST00000542113 LINC01548A6NM66 108 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 E9PLD3 99 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 NXPH4O95158 308 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 IGHG2P01859 326 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 MGPP08493 103 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 TMEM219Q86XT9 240 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 NEXN-AS1Q8NBZ9 246 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 CYSLTR1Q9Y271 337 aa5.16□□□□□ -1.58
NKRF-204ENST00000542113 SETD2Q9BYW2 2564 aaPredicted RBP5.16□□□□□ -1.58
NKRF-204ENST00000542113 RPL11P62913 178 aaKnown RBP5.15□□□□□ -1.58
NKRF-204ENST00000542113 ANXA2RQ3ZCQ2 193 aa5.15□□□□□ -1.58
NKRF-204ENST00000542113 C2orf66Q6UXQ4 117 aa5.15□□□□□ -1.58
NKRF-204ENST00000542113 PHLDA1Q8WV24 401 aaPredicted RBP5.15□□□□□ -1.58
NKRF-204ENST00000542113 RASL10AQ92737 203 aa5.15□□□□□ -1.58
NKRF-204ENST00000542113 FAM19A4Q96LR4 140 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms