RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 SGK494Q96LW2 274 aa6.19□□□□□ -1.42
CLSTN3-212ENST00000541770 LINC00479Q96M42 142 aa6.19□□□□□ -1.42
CLSTN3-212ENST00000541770 VAX2Q9UIW0 290 aa6.19□□□□□ -1.42
CLSTN3-212ENST00000541770 CELA1Q9UNI1 258 aa6.19□□□□□ -1.42
CLSTN3-212ENST00000541770 ZFP30Q9Y2G7 519 aa6.19□□□□□ -1.42
CLSTN3-212ENST00000541770 TRAV21A0A0B4J279 112 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 LOC102723971A0A1B0GUV8 181 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 SCO2A0A1W2PP80 73 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 ZNF705GA8MUZ8 300 aaPredicted RBP6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 PDE6DO43924 150 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 NDUFS6O75380 124 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 AKR1C3P42330 323 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 UBE2G1P62253 170 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 C12orf74Q32Q52 190 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 ANXA2RQ3ZCQ2 193 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 SMUG1Q53HV7 270 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 COX8CQ7Z4L0 72 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 Q86TA4 180 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 RNASE8Q8TDE3 154 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 TMEM263Q8WUH6 116 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 C16orf74Q96GX8 76 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 DYNC1H1Q14204 4646 aaKnown RBP6.18□□□□□ -1.42
CLSTN3-212ENST00000541770 DNAH2Q9P225 4427 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 FAT2Q9NYQ8 4349 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 TEX48A0A1B0GUV7 120 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 PLAC8L1A1L4L8 177 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 LTAP01374 205 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 AZU1P20160 251 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 TDRG1Q3Y452 100 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 C1orf134Q5TEV5 83 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 EIF4E3Q8N5X7 224 aaKnown RBP6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 C8orf49Q96NF6 230 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 MED9Q9NWA0 146 aa6.17□□□□□ -1.42
CLSTN3-212ENST00000541770 IGHV1OR15-1A0A075B7D0 117 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 RBFOX3A6NFN3 312 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 ATP6V1G1O75348 118 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 GCGP01275 180 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 PRM2P04554 102 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 PFN1P07737 140 aaKnown RBP6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 SPART-AS1P0CW21 52 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 HTN1P15515 57 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 ZNF506Q5JVG8 444 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 IBA57Q5T440 356 aaKnown RBP6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 Q6ZQT7 251 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 TMEM183AQ8IXX5 376 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 FAM210AQ96ND0 272 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 MLST8Q9BVC4 326 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 DKK2Q9UBU2 259 aa6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 TIMM8BQ9Y5J9 83 aaPredicted RBP6.16□□□□□ -1.42
CLSTN3-212ENST00000541770 PKHD1P08F94 4074 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 CBY3A6NI87 242 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 LYRM9A8MSI8 78 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 FABP5P3A8MUU1 101 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 TMEM250H0YL14 139 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 HTN3P15516 51 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 S100A1P23297 94 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 RPL35P42766 123 aaKnown RBP6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 ZNF80P51504 273 aaPredicted RBP6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 EMP1P54849 157 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 DAZ2Q13117 558 aaKnown RBP6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 FAM222AQ5U5X8 452 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 FAM159AQ6UWV7 190 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 BAGE2Q86Y30 109 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 SMIM12Q96EX1 92 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 KCNS1Q96KK3 526 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 TP53TG3Q9ULZ0 132 aa6.15□□□□□ -1.42
CLSTN3-212ENST00000541770 PKD1P98161 4303 aa6.15□□□□□ -1.43
CLSTN3-212ENST00000541770 DNAH11Q96DT5 4516 aa6.15□□□□□ -1.43
CLSTN3-212ENST00000541770 DNAH17Q9UFH2 4485 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 TRGV11A0A075B6L2 103 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 SNURFLB1AK76 121 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 CDK2AP2O75956 126 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 TCL1AP56279 114 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 TNP2Q05952 138 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 ZNF674Q2M3X9 581 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 TOR2AQ5JU69 321 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 MUC21Q5SSG8 566 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 Q6ZR54 194 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 ZC2HC1AQ96GY0 325 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 DERL1Q9BUN8 251 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 EIF5A2Q9GZV4 153 aaKnown RBP6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 NACAE9PAV3 2078 aa6.14□□□□□ -1.43
CLSTN3-212ENST00000541770 RAB19A4D1S5 217 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 CRIP1P50238 77 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 ZNF415Q09FC8 603 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 FAM162BQ5T6X4 162 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 UQCC3Q6UW78 93 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 LINC00612Q8N6U2 182 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 SMDT1Q9H4I9 107 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 SDF2L1Q9HCN8 221 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 NOP10Q9NPE3 64 aaKnown RBP6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 GSN-AS1Q9NRJ2 163 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 C11orf21Q9P2W6 132 aa6.13□□□□□ -1.43
CLSTN3-212ENST00000541770 IGHV3-16A0A0C4DH30 117 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms