RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 MRPL23Q16540 153 aaKnown RBP9.55□□□□□ -0.88
SUDS3-203ENST00000541591 NEGR1Q7Z3B1 354 aa9.55□□□□□ -0.88
SUDS3-203ENST00000541591 OR4C5Q8NGB2 326 aa9.55□□□□□ -0.88
SUDS3-203ENST00000541591 PCNPQ8WW12 178 aaKnown RBP9.55□□□□□ -0.88
SUDS3-203ENST00000541591 RAB24Q969Q5 203 aa9.55□□□□□ -0.88
SUDS3-203ENST00000541591 LENEPQ9Y5L5 61 aa9.55□□□□□ -0.88
SUDS3-203ENST00000541591 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 TRAV21A0A0B4J279 112 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 STAG3L2P0CL84 134 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 STAG3L3P0CL85 134 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 GCHFRP30047 84 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 RASL10AQ92737 203 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 SPXQ9BT56 116 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
SUDS3-203ENST00000541591 GGTLC3B5MD39 225 aa9.53□□□□□ -0.88
SUDS3-203ENST00000541591 M0R2P5 195 aa9.53□□□□□ -0.88
SUDS3-203ENST00000541591 CDK2AP2O75956 126 aa9.53□□□□□ -0.88
SUDS3-203ENST00000541591 DPPA3Q6W0C5 159 aa9.53□□□□□ -0.88
SUDS3-203ENST00000541591 PRNTQ86SH4 94 aa9.53□□□□□ -0.88
SUDS3-203ENST00000541591 TMED6Q8WW62 240 aa9.53□□□□□ -0.88
SUDS3-203ENST00000541591 ASB13Q8WXK3 278 aa9.53□□□□□ -0.88
SUDS3-203ENST00000541591 FXYD6-FXYD2A0A087WZ82 144 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 GCGP01275 180 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 TCRAP04437 139 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 UBE2G2P60604 165 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 SLAQ13239 276 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 TDRG1Q3Y452 100 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 RPL7L1Q6DKI1 246 aaKnown RBP9.52□□□□□ -0.89
SUDS3-203ENST00000541591 NHLRC2Q8NBF2 726 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 OR2G3Q8NGZ4 309 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 AQP10Q96PS8 301 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 PSG8Q9UQ74 426 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 LY96Q9Y6Y9 160 aa9.52□□□□□ -0.89
SUDS3-203ENST00000541591 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
SUDS3-203ENST00000541591 PTTG1O95997 202 aa9.51□□□□□ -0.89
SUDS3-203ENST00000541591 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
SUDS3-203ENST00000541591 BTF3P20290 206 aaKnown RBP9.51□□□□□ -0.89
SUDS3-203ENST00000541591 FGF8P55075 233 aaPredicted RBP9.51□□□□□ -0.89
SUDS3-203ENST00000541591 SUMO1P63165 101 aaKnown RBP9.51□□□□□ -0.89
SUDS3-203ENST00000541591 C5orf17Q8NAS9 161 aa9.51□□□□□ -0.89
SUDS3-203ENST00000541591 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
SUDS3-203ENST00000541591 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
SUDS3-203ENST00000541591 PSMG3Q9BT73 122 aaPredicted RBP9.51□□□□□ -0.89
SUDS3-203ENST00000541591 RNF222A6NCQ9 220 aa9.5□□□□□ -0.89
SUDS3-203ENST00000541591 ZNF726P1Q15940 193 aa9.5□□□□□ -0.89
SUDS3-203ENST00000541591 SCRT2Q9NQ03 307 aa9.5□□□□□ -0.89
SUDS3-203ENST00000541591 PGPEP1LA6NFU8 196 aa9.49□□□□□ -0.89
SUDS3-203ENST00000541591 FBLL1A6NHQ2 334 aaKnown RBP9.49□□□□□ -0.89
SUDS3-203ENST00000541591 GATA1P15976 413 aaPredicted RBP9.49□□□□□ -0.89
SUDS3-203ENST00000541591 PPT1P50897 306 aa9.49□□□□□ -0.89
SUDS3-203ENST00000541591 ERVFC1-1P60608 527 aa9.49□□□□□ -0.89
SUDS3-203ENST00000541591 FLI1Q01543 452 aaPredicted RBP9.49□□□□□ -0.89
SUDS3-203ENST00000541591 ZNF876PQ49A33 203 aa9.49□□□□□ -0.89
SUDS3-203ENST00000541591 ACTR3CQ9C0K3 210 aaPredicted RBP9.49□□□□□ -0.89
SUDS3-203ENST00000541591 BATF3Q9NR55 127 aa9.49□□□□□ -0.89
SUDS3-203ENST00000541591 SMLR1H3BR10 107 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 CXorf1O96002 111 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 ORM1P02763 201 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 CRYGDP07320 174 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 HAMPP81172 84 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 ZNF506Q5JVG8 444 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 CFAP126Q5VTH2 177 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 CYB561D1Q8N8Q1 229 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 SLC25A29Q8N8R3 303 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 SUN5Q8TC36 379 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 KCNS1Q96KK3 526 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 TXNDC17Q9BRA2 123 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 MSRB1Q9NZV6 116 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 EPDR1Q9UM22 224 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 VPS13BQ7Z7G8 4022 aa9.48□□□□□ -0.89
SUDS3-203ENST00000541591 A0A087WTM6 91 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 RS1O15537 224 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 IGHV3-30P01768 117 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 IGHV3-33P01772 117 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 GIPP09681 153 aaPredicted RBP9.47□□□□□ -0.89
SUDS3-203ENST00000541591 IGHV3-30-3P0DP02 117 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 IGHV3-30-5P0DP03 117 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 EVI2AP22794 236 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 ZFP69Q49AA0 526 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 SMUG1Q53HV7 270 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 Q8N1X5 172 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 Q8N3U1 123 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 C9orf85Q96MD7 179 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 Q9HAA7 133 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 TMEM167BQ9NRX6 74 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 TNFSF18Q9UNG2 199 aa9.47□□□□□ -0.89
SUDS3-203ENST00000541591 G3V3Q6 166 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 K7EQM0 130 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 IFNA7P01567 189 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
SUDS3-203ENST00000541591 RNASE3P12724 160 aaKnown RBP9.46□□□□□ -0.9
SUDS3-203ENST00000541591 KRTAP10-1P60331 282 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 ARL6IP6Q8N6S5 226 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
SUDS3-203ENST00000541591 OR2T35Q8NGX2 323 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 JPT2Q9H910 190 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 ARL2-SNX15V9GYD0 113 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.9
SUDS3-203ENST00000541591 IGKV3D-20A0A0C4DH25 116 aa9.45□□□□□ -0.9
SUDS3-203ENST00000541591 TAAR5O14804 337 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms