RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783		H3BUA1	57 aa		4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IGKV2D-40	P01614	121 aa	Predicted RBP	4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	CT45A10	P0DMU9	189 aa		4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ZNF562	Q6V9R5	426 aa		4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	OR9G4	Q8NGQ1	327 aa		4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		Q8TAT8	98 aa		4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	CENPE	Q02224	2701 aa		4.4	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TRBV19	A0A075B6N1	114 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	NPIPB5	A8MRT5	1133 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IGLV1-47	P01700	117 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TMEM89	A2RUT3	159 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ODF3B	A8MYP8	253 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SH2D1A	O60880	128 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IGKV1-17	P01599	117 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ETDB	Q3ZM63	59 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	OR5A1	Q8NGJ0	315 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SIGMAR1	Q99720	223 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IGHV3-35	A0A0C4DH35	117 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	FAM223B	A6NKX1	122 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	INS-IGF2	F8WCM5	200 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		H3BMG7	143 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IL4	P05112	153 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	LEP	P41159	167 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	RAB9A	P51151	201 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	INSL3	P51460	131 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	CMC4	P56277	68 aa	Predicted RBP	4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SIGLEC15	Q6ZMC9	328 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	FAM223A	Q8IWN6	122 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	CHAC1	Q9BUX1	264 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SIGLEC9	Q9Y336	463 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SVEP1	Q4LDE5	3571 aa		4.39	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SON	P18583	2426 aa	Known RBP	4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		K7EQM0	130 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	NDUFA7	O95182	113 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IGHV3-23	P01764	117 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	HLA-DMB	P28068	263 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	DLX6	P56179	175 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	RPL11	P62913	178 aa	Known RBP	4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SFTA2	Q6UW10	78 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		A6NDX4	124 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	EGR2	P11161	476 aa	Predicted RBP	4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	VGLL1	Q99990	258 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	GAGE12H	A6NDE8	117 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ORM1	P02763	201 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ZNF80	P51504	273 aa	Predicted RBP	4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	NSUN5P1	Q3KNT7	163 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ZC2HC1B	Q5TFG8	222 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	AKAP13	Q12802	2813 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	UBR5	O95071	2799 aa	Predicted RBP	4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TRBV25-1	A0A075B6N4	114 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TEX22	C9J3V5	150 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	MAPKAPK5-AS1	Q8N8E1	139 aa		4.38	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	AGRN	O00468	2067 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SPAG8	Q99932	426 aa	Predicted RBP	4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SHANK2-AS3	Q9BTD1	123 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	C21orf62	Q9NYP8	219 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	HHLA3	Q9XRX5	114 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	UFC1	Q9Y3C8	167 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		I3L2K1	104 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SIVA1	O15304	175 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ODF1	Q14990	250 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ZNF493	Q6ZR52	646 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ZNF491	Q8N8L2	437 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	KLHL30-AS1	Q8NEE0	82 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	METTL26	Q96S19	204 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TMEM14C	Q9P0S9	112 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		U3KQK5	164 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	CD300E	Q496F6	205 aa	Predicted RBP	4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	NPB	Q8NG41	125 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	RNF125	Q96EQ8	232 aa		4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.37	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TRBV7-1	A0A0A6YYK4	115 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TRAV26-2	A0A0B4J265	109 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		A0A1B0GW15	77 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		A0A1W2PRX2	142 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IGLL5	B9A064	214 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	NDUFA3	O95167	84 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SMIM17	P0DL12	118 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ID1	P41134	155 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ZNF479	Q96JC4	524 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	AAMDC	Q9H7C9	122 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ARHGAP32	A7KAX9	2087 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		H3BRN7	92 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		K7EIM0	57 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	IGKC	P01834	107 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ARL3	P36405	182 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	ERCC8	Q13216	396 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SMR3A	Q99954	134 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	MAP1LC3A	Q9H492	121 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	MRPL35	Q9NZE8	188 aa	Known RBP	4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	SPRY2	O43597	315 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	TNFRSF6B	O95407	300 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783		Q6AWC8	147 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	CEND1	Q8N111	149 aa		4.36	□□□□□ -1.71
RAPGEF4-215	ENST00000540783	RNF185	Q96GF1	192 aa		4.36	□□□□□ -1.71

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