RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PLNP26678 52 aa9.38□□□□□ -0.91
NPC1-202ENST00000540608 RIPPLY3P57055 190 aa9.38□□□□□ -0.91
NPC1-202ENST00000540608 ATP6V0BQ99437 205 aa9.38□□□□□ -0.91
NPC1-202ENST00000540608 SPTBN4Q9H254 2564 aa9.38□□□□□ -0.91
NPC1-202ENST00000540608 NHP2Q9NX24 153 aaKnown RBP9.37□□□□□ -0.91
NPC1-202ENST00000540608 TRAV12-1A0A0B4J245 112 aa9.37□□□□□ -0.91
NPC1-202ENST00000540608 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.37□□□□□ -0.91
NPC1-202ENST00000540608 H3BVH4 76 aa9.37□□□□□ -0.91
NPC1-202ENST00000540608 EFNA4P52798 201 aa9.37□□□□□ -0.91
NPC1-202ENST00000540608 C5orf56Q8N8D9 126 aa9.37□□□□□ -0.91
NPC1-202ENST00000540608 ITLN2Q8WWU7 325 aaPredicted RBP9.37□□□□□ -0.91
NPC1-202ENST00000540608 SMIM2Q9BVW6 85 aa9.37□□□□□ -0.91
NPC1-202ENST00000540608 UBTD1Q9HAC8 227 aa9.37□□□□□ -0.91
NPC1-202ENST00000540608 HIVEP3Q5T1R4 2406 aa9.37□□□□□ -0.91
NPC1-202ENST00000540608 H7C1H1 209 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 PRR9Q5T870 116 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 E9PLD3 99 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 C9orf139Q6ZV77 190 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 LINC00477Q96M19 166 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 PRORYQ9H606 182 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 ITPR1Q14643 2758 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 CELSR1Q9NYQ6 3014 aa9.36□□□□□ -0.91
NPC1-202ENST00000540608 NPFFO15130 113 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 LY6DQ14210 128 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 ORMDL2Q53FV1 153 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 CACNA1BQ00975 2339 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 CHD8Q9HCK8 2581 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 F8VRH5 84 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 VPS13CQ709C8 3753 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 IGLL5B9A064 214 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 IGF1P05019 195 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 LMO4P61968 165 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 FAM223AQ8IWN6 122 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 TOMM6Q96B49 74 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 C20orf78Q9BR46 151 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 BPESC1Q9GZL8 116 aa9.35□□□□□ -0.91
NPC1-202ENST00000540608 AKAP6Q13023 2319 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 TRAV41A0A0B4J266 112 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 K7EMI3 77 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 SLC25A16P16260 332 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
NPC1-202ENST00000540608 C12orf74Q32Q52 190 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 C19orf54Q5BKX5 351 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 ZFAND2AQ8N6M9 145 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 NCOR2Q9Y618 2525 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 TRAV21A0A0B4J279 112 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 RASL10AQ92737 203 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 SCGB3A1Q96QR1 104 aa9.34□□□□□ -0.91
NPC1-202ENST00000540608 LINC01619G3V211 115 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 OVOL1O14753 267 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 NEXN-AS1Q8NBZ9 246 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 HIST1H4GQ99525 98 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
NPC1-202ENST00000540608 M0R381 172 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 ARL3P36405 182 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 RPL24P83731 157 aaKnown RBP9.33□□□□□ -0.92
NPC1-202ENST00000540608 GPHB5Q86YW7 130 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 OR10J6PQ8NGY7 276 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 DPH3P1Q9H4G8 78 aa9.33□□□□□ -0.92
NPC1-202ENST00000540608 F8W1H4 67 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 CRIP2P52943 208 aaPredicted RBP9.32□□□□□ -0.92
NPC1-202ENST00000540608 TMEM219Q86XT9 240 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 MOB4Q9Y3A3 225 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 TRBV7-3A0A075B6L6 115 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 MYMXA0A1B0GTQ4 84 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 J3KRW8 73 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
NPC1-202ENST00000540608 ASIPP42127 132 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 ZNF479Q96JC4 524 aa9.32□□□□□ -0.92
NPC1-202ENST00000540608 C19orf84I3L1E1 186 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 SOCS3O14543 225 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 MED14OSP0DP75 135 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 UNQ9165/PRO28630Q6UXU0 137 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 C14orf178Q8N769 122 aaPredicted RBP9.31□□□□□ -0.92
NPC1-202ENST00000540608 KLK15Q9H2R5 256 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 LINC00527Q9UJ94 153 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 PHLDA3Q9Y5J5 127 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 OR11H12B2RN74 326 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 OR11H1Q8NG94 326 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 OR11H2Q8NH07 326 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 RPL39LQ96EH5 51 aaKnown RBP9.31□□□□□ -0.92
NPC1-202ENST00000540608 FAM19A4Q96LR4 140 aa9.31□□□□□ -0.92
NPC1-202ENST00000540608 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
NPC1-202ENST00000540608 NDUFA4O00483 81 aa9.3□□□□□ -0.92
NPC1-202ENST00000540608 SPRY2O43597 315 aa9.3□□□□□ -0.92
NPC1-202ENST00000540608 ANXA2RQ3ZCQ2 193 aa9.3□□□□□ -0.92
NPC1-202ENST00000540608 A0A1B0GWB2 263 aa9.3□□□□□ -0.92
NPC1-202ENST00000540608 TMEM238C9JI98 176 aa9.3□□□□□ -0.92
NPC1-202ENST00000540608 C2orf66Q6UXQ4 117 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 BAALCQ8WXS3 180 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 SPOCK3Q9BQ16 436 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 IGHV3OR16-10A0A075B7F0 116 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 PPP1R17O96001 155 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 TRBV12-3P01733 135 aa9.29□□□□□ -0.92
NPC1-202ENST00000540608 WFDC2Q14508 124 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms