RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TEX261Q6UWH6 196 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 ZNF493Q6ZR52 646 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 Q6ZTC4 211 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 EIF4E3Q8N5X7 224 aaKnown RBP4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 C11orf72Q8NBR9 251 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 C11orf52Q96A22 123 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 TXNDC17Q9BRA2 123 aa4.98□□□□□ -1.61
LPCAT3-209ENST00000540060 PLECQ15149 4684 aaKnown RBP4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 IGHV1OR15-1A0A075B7D0 117 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 TRAV21A0A0B4J279 112 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 CXorf65A6NEN9 183 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 CBY3A6NI87 242 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 LYRM9A8MSI8 78 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 RGS13O14921 159 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 GCGP01275 180 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 PFN1P07737 140 aaKnown RBP4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 SPART-AS1P0CW21 52 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 C12orf74Q32Q52 190 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 TDRG1Q3Y452 100 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 SMUG1Q53HV7 270 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 MUC21Q5SSG8 566 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 SAPCD1Q5SSQ6 148 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 IBA57Q5T440 356 aaKnown RBP4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 ZNF767PQ75MW2 155 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 COX8CQ7Z4L0 72 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 ZNF680Q8NEM1 530 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 DERL1Q9BUN8 251 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 TP53TG3Q9ULZ0 132 aa4.97□□□□□ -1.61
LPCAT3-209ENST00000540060 NUPR2A6NF83 97 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 SNURFLB1AK76 121 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 PDE6DO43924 150 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 S100A9P06702 114 aaKnown RBP4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 TAGLN2P37802 199 aaKnown RBP4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 TCL1AP56279 114 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 FAM159AQ6UWV7 190 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 LINC00612Q8N6U2 182 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 PHLDA1Q8WV24 401 aaPredicted RBP4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 ZC2HC1AQ96GY0 325 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 C11orf21Q9P2W6 132 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 VAX2Q9UIW0 290 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 NAGKQ9UJ70 344 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 ZFP30Q9Y2G7 519 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 TIMM8BQ9Y5J9 83 aaPredicted RBP4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 DNAH1Q9P2D7 4330 aa4.96□□□□□ -1.62
LPCAT3-209ENST00000540060 ALMS1Q8TCU4 4167 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 TRGV11A0A075B6L2 103 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 TRAV10A0A0B4J240 114 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 TYMSP04818 313 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 RPL35P42766 123 aaKnown RBP4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 DAD1P61803 113 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 ZNF415Q09FC8 603 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 DAZ2Q13117 558 aaKnown RBP4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 ZNF506Q5JVG8 444 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 CEMP1Q6PRD7 247 aaPredicted RBP4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 TMEM183AQ8IXX5 376 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 NHLRC2Q8NBF2 726 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 PCNPQ8WW12 178 aaKnown RBP4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 KCNS1Q96KK3 526 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 MLST8Q9BVC4 326 aa4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 NOP10Q9NPE3 64 aaKnown RBP4.95□□□□□ -1.62
LPCAT3-209ENST00000540060 SACSQ9NZJ4 4579 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 NACAE9PAV3 2078 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 TRBV20OR9-2A0A075B6H5 130 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 IGHV3-16A0A0C4DH30 117 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 RBFOX3A6NFN3 312 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 SPINK4O60575 86 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 SH2D1AO60880 128 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 DEFB130BP0DP73 79 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 DEFB130AP0DP74 79 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 CRIP1P50238 77 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 ZNF674Q2M3X9 581 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 CENPWQ5EE01 88 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 TOR2AQ5JU69 321 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 FAM162BQ5T6X4 162 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 Q6ZTI0 123 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 FAM210AQ96ND0 272 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 SDF2L1Q9HCN8 221 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 MDFICQ9P1T7 246 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 MUC4Q99102 2169 aa4.94□□□□□ -1.62
LPCAT3-209ENST00000540060 DEFB131BA0A096LNP1 70 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 IGKV3D-20A0A0C4DH25 116 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 GAGE12BA1L429 117 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 FABP5P3A8MUU1 101 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 TMEM250H0YL14 139 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 GNRH2O43555 120 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 NDUFS6O75380 124 aaKnown RBP4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 GAGE7O76087 117 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 IGLV2-8P01709 118 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 GAGE12FP0CL80 117 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 GAGE12GP0CL81 117 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 GAGE12IP0CL82 117 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 GNG4P50150 75 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 BAGE2Q86Y30 109 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 SMIM12Q96EX1 92 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 C18orf15Q96N68 181 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 MED9Q9NWA0 146 aa4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 MRPL16Q9NX20 251 aaKnown RBP4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
LPCAT3-209ENST00000540060 RYR2Q92736 4967 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms