RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 HSBP1O75506 76 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 APCSP02743 223 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 IGLL1P15814 213 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 SEC11AP67812 179 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 SLC25A34Q6PIV7 304 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 C18orf65Q6ZTR6 163 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 KLHL30-AS1Q8NEE0 82 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 OR1N2Q8NGR9 330 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 RNASE7Q9H1E1 156 aaKnown RBP12.8□□□□□ -0.36
COPS3-212ENST00000539941 MS4A6AQ9H2W1 248 aa12.8□□□□□ -0.36
COPS3-212ENST00000539941 SOCS3O14543 225 aa12.79□□□□□ -0.36
COPS3-212ENST00000539941 HLA-DMBP28068 263 aa12.79□□□□□ -0.36
COPS3-212ENST00000539941 SRIP30626 198 aa12.79□□□□□ -0.36
COPS3-212ENST00000539941 IGFL4Q6B9Z1 124 aa12.79□□□□□ -0.36
COPS3-212ENST00000539941 AMMECR1LQ6DCA0 310 aa12.79□□□□□ -0.36
COPS3-212ENST00000539941 OR11H1Q8NG94 326 aa12.79□□□□□ -0.36
COPS3-212ENST00000539941 IGKV2-40A0A087WW87 121 aaPredicted RBP12.78□□□□□ -0.36
COPS3-212ENST00000539941 IGKV2D-40P01614 121 aaPredicted RBP12.78□□□□□ -0.36
COPS3-212ENST00000539941 HIST1H1AQ02539 215 aaPredicted RBP12.78□□□□□ -0.36
COPS3-212ENST00000539941 Q6ZVH6 145 aa12.78□□□□□ -0.36
COPS3-212ENST00000539941 COX8CQ7Z4L0 72 aa12.78□□□□□ -0.36
COPS3-212ENST00000539941 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
COPS3-212ENST00000539941 PEMTQ9UBM1 199 aa12.78□□□□□ -0.36
COPS3-212ENST00000539941 C2orf70A6NJV1 201 aa12.77□□□□□ -0.36
COPS3-212ENST00000539941 PRSS47A8MTI9 375 aa12.77□□□□□ -0.36
COPS3-212ENST00000539941 CRXO43186 299 aaPredicted RBP12.77□□□□□ -0.36
COPS3-212ENST00000539941 RPL11P62913 178 aaKnown RBP12.77□□□□□ -0.36
COPS3-212ENST00000539941 DEFB136Q30KP8 78 aa12.77□□□□□ -0.36
COPS3-212ENST00000539941 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.36
COPS3-212ENST00000539941 TMEM70Q9BUB7 260 aa12.77□□□□□ -0.36
COPS3-212ENST00000539941 TSSC4Q9Y5U2 329 aaPredicted RBP12.77□□□□□ -0.36
COPS3-212ENST00000539941 A0A1B0GV72 72 aa12.77□□□□□ -0.37
COPS3-212ENST00000539941 C19orf71A6NCJ1 209 aa12.77□□□□□ -0.37
COPS3-212ENST00000539941 M0R2Z0 102 aa12.77□□□□□ -0.37
COPS3-212ENST00000539941 CD28P10747 220 aa12.77□□□□□ -0.37
COPS3-212ENST00000539941 SLURP1P55000 103 aa12.77□□□□□ -0.37
COPS3-212ENST00000539941 CT83Q5H943 113 aa12.77□□□□□ -0.37
COPS3-212ENST00000539941 RCHY1Q96PM5 261 aa12.77□□□□□ -0.37
COPS3-212ENST00000539941 IZUMO1RA6ND01 250 aa12.76□□□□□ -0.37
COPS3-212ENST00000539941 NTF3P20783 257 aa12.76□□□□□ -0.37
COPS3-212ENST00000539941 MPV17L2Q567V2 206 aa12.76□□□□□ -0.37
COPS3-212ENST00000539941 DAZAP1Q96EP5 407 aaKnown RBP12.76□□□□□ -0.37
COPS3-212ENST00000539941 NDFIP1Q9BT67 221 aa12.76□□□□□ -0.37
COPS3-212ENST00000539941 TMEM191AQ9H0A3 160 aa12.76□□□□□ -0.37
COPS3-212ENST00000539941 SMIM27A0A1W2PRY6 76 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 GAGE10A6NGK3 116 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 PRAC2D3DTV9 90 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 NUDT3O95989 172 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 CT45A10P0DMU9 189 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 EDN2P20800 178 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 ID1P41134 155 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 PROK1P58294 105 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 FHL3Q13643 280 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 C18orf32Q8TCD1 76 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 AP1S3Q96PC3 154 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 PRR25Q96S07 402 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 VGLL1Q99990 258 aa12.75□□□□□ -0.37
COPS3-212ENST00000539941 OVOL1O14753 267 aa12.74□□□□□ -0.37
COPS3-212ENST00000539941 P01737 135 aa12.74□□□□□ -0.37
COPS3-212ENST00000539941 C9orf47Q6ZRZ4 202 aa12.74□□□□□ -0.37
COPS3-212ENST00000539941 OR9G4Q8NGQ1 327 aa12.74□□□□□ -0.37
COPS3-212ENST00000539941 ZC2HC1AQ96GY0 325 aa12.74□□□□□ -0.37
COPS3-212ENST00000539941 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 HAX1O00165 279 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 OR5AL1P0C617 328 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 OR5A1Q8NGJ0 315 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 DCANP1Q8TF63 244 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 CITED2Q99967 270 aaPredicted RBP12.73□□□□□ -0.37
COPS3-212ENST00000539941 RPP21Q9H633 154 aaKnown RBP12.73□□□□□ -0.37
COPS3-212ENST00000539941 TMEM78Q5T7P6 136 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 UFSP1Q6NVU6 142 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 LINC00322Q6ZN03 302 aaPredicted RBP12.73□□□□□ -0.37
COPS3-212ENST00000539941 ATOH7Q8N100 152 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 RAX2Q96IS3 184 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 C20orf173Q96LM9 149 aa12.73□□□□□ -0.37
COPS3-212ENST00000539941 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
COPS3-212ENST00000539941 DLX4Q92988 240 aaPredicted RBP12.72□□□□□ -0.37
COPS3-212ENST00000539941 CHCHD1Q96BP2 118 aaKnown RBP12.72□□□□□ -0.37
COPS3-212ENST00000539941 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
COPS3-212ENST00000539941 A8MWL6 223 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 CCL24O00175 119 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 ZNF138P52744 262 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 EBLN2Q6P2I7 272 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 FAM19A2Q8N3H0 131 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 C11orf44Q8N8P7 122 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 C8orf49Q96NF6 230 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 AGPAT4-IT1Q9H0P7 198 aa12.71□□□□□ -0.37
COPS3-212ENST00000539941 MUC21A0A0G2JKD1 596 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 MUC21A0A140T8X8 626 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 FAM231BA6NCW3 169 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 A6NDN8 102 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 H3BRM9 83 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
COPS3-212ENST00000539941 ERCC8Q13216 396 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 MUC21Q5SSG8 566 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 ADAMTSL5Q6ZMM2 481 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 ATP5L2Q7Z4Y8 100 aa12.7□□□□□ -0.38
COPS3-212ENST00000539941 OR10J6PQ8NGY7 276 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms