RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 IQCF6A8MYZ5 107 aa4.68□□□□□ -1.66
SNHG1-211ENST00000539921 LGALS3P17931 250 aaKnown RBP4.68□□□□□ -1.66
SNHG1-211ENST00000539921 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
SNHG1-211ENST00000539921 Q1RN00 199 aa4.68□□□□□ -1.66
SNHG1-211ENST00000539921 PRR15Q8IV56 129 aa4.68□□□□□ -1.66
SNHG1-211ENST00000539921 SMCR5Q8TEV8 140 aa4.68□□□□□ -1.66
SNHG1-211ENST00000539921 A8MZ25 164 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 USP17L23D6RBM5 183 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 H3BRN7 92 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 SCRG1O75711 98 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 IGHV1-69P01742 117 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 CGB3P0DN86 165 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 CGB7P0DN87 165 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 EDN2P20800 178 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 DLX1P56177 255 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 FXYD7P58549 80 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 HOXA4Q00056 320 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-211ENST00000539921 CCL14Q16627 93 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 FAM53AQ6NSI3 398 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-211ENST00000539921 SFTA2Q6UW10 78 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 WFDC3Q8IUB2 231 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 CCL4L1Q8NHW4 92 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 KLF14Q8TD94 323 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-211ENST00000539921 C16orf92Q96LL3 132 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 TMEM243Q9BU79 118 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 RNF186Q9NXI6 227 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 PKIGQ9Y2B9 76 aa4.67□□□□□ -1.66
SNHG1-211ENST00000539921 TET2Q6N021 2002 aaPredicted RBP4.67□□□□□ -1.66
SNHG1-211ENST00000539921 IGLV4-69A0A075B6H9 119 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 IGHV1OR15-9A0A0B4J2B8 117 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 SMKR1H3BMG3 65 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 IGHV4-39P01824 125 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 MED14OSP0DP75 135 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-211ENST00000539921 TNFRSF4P43489 277 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 PMAIP1Q13794 54 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 C2orf66Q6UXQ4 117 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 WDR86Q86TI4 376 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 C17orf82Q86X59 251 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-211ENST00000539921 VKORC1L1Q8N0U8 176 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 ZNF491Q8N8L2 437 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 TET1Q8NFU7 2136 aa4.66□□□□□ -1.66
SNHG1-211ENST00000539921 UNC13CQ8NB66 2214 aa4.65□□□□□ -1.66
SNHG1-211ENST00000539921 IGHV1OR21-1A0A087WYE8 117 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 M0R3E3 92 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 COX7A2LO14548 114 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 SAA1P0DJI8 122 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-211ENST00000539921 SAA2P0DJI9 122 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-211ENST00000539921 NBL1P41271 181 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 GFERP55789 205 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 SUMO2P61956 95 aaKnown RBP4.65□□□□□ -1.67
SNHG1-211ENST00000539921 RSPO4Q2I0M5 234 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-211ENST00000539921 RPL39P5Q59GN2 51 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 C9orf139Q6ZV77 190 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 TMEM61Q8N0U2 210 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 RNF182Q8N6D2 247 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 SAP25Q8TEE9 199 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 CXXC4Q9H2H0 198 aa4.65□□□□□ -1.67
SNHG1-211ENST00000539921 C2orf16Q68DN1 1984 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 TRAV41A0A0B4J266 112 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 A0A0U1RQV1 116 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 RBMY1BA6NDE4 496 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 RBMY1EA6NEQ0 496 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 IGIPA6NJ69 53 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 ENSAO43768 121 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 LYZL6O75951 148 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 RBMY1DP0C7P1 496 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 RBMY1A1P0DJD3 496 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 RBMY1CP0DJD4 496 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 EGR2P11161 476 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 B3GALT5-AS1P59052 145 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 DAZ2Q13117 558 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 RBMY1FQ15415 496 aaKnown RBP4.64□□□□□ -1.67
SNHG1-211ENST00000539921 ZNF876PQ49A33 203 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 Q6ZS46 218 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 ZNF833PQ6ZTB9 187 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 MDS2Q8NDY4 140 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 C10orf105Q8TEF2 133 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 LTBP2Q14767 1821 aa4.64□□□□□ -1.67
SNHG1-211ENST00000539921 ZNF407Q9C0G0 2248 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 TRAV7A0A075B6U4 112 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV4OR15-8A0A075B7B6 117 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV3OR16-10A0A075B7F0 116 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 A0A087WW49 117 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 TRAV26-2A0A0B4J265 109 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 IGHV5-51A0A0C4DH38 117 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 SPTY2D1-AS1A0A0U1RR47 76 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 PLAC8L1A1L4L8 177 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 H3BS24 57 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 H7BZZ5 65 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 NTN3O00634 580 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-211ENST00000539921 MRPL33O75394 65 aaKnown RBP4.63□□□□□ -1.67
SNHG1-211ENST00000539921 PATE4P0C8F1 98 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 ZNF80P51504 273 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-211ENST00000539921 TIRAPP58753 221 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 WT1-ASQ06250 92 aa4.63□□□□□ -1.67
SNHG1-211ENST00000539921 FHL2Q14192 279 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms