RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CMTM2Q8TAZ6 248 aa11.45□□□□□ -0.58
DDB1-216ENST00000539739 RARRES2Q99969 163 aa11.45□□□□□ -0.58
DDB1-216ENST00000539739 WFDC10AQ9H1F0 79 aa11.45□□□□□ -0.58
DDB1-216ENST00000539739 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
DDB1-216ENST00000539739 STHQ8IWL8 128 aa11.44□□□□□ -0.58
DDB1-216ENST00000539739 ARL2-SNX15V9GYD0 113 aa11.44□□□□□ -0.58
DDB1-216ENST00000539739 M0R3E3 92 aa11.43□□□□□ -0.58
DDB1-216ENST00000539739 Q6ZN92 141 aa11.43□□□□□ -0.58
DDB1-216ENST00000539739 MANBALQ9NQG1 85 aa11.43□□□□□ -0.58
DDB1-216ENST00000539739 PAM16Q9Y3D7 125 aa11.43□□□□□ -0.58
DDB1-216ENST00000539739 KNCNA6PVL3 124 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 IFNA1P01562 189 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 IGHV4-30-4P0DP06 118 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 CCL20P78556 96 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 SLAQ13239 276 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 GNG13Q9P2W3 67 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 A0A0J9YX75 114 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 H7BYZ3 331 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 K7EIL1 84 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 PAGE4O60829 102 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 DUSP14O95147 198 aaKnown RBP11.42□□□□□ -0.58
DDB1-216ENST00000539739 SLC25A5P05141 298 aaKnown RBP11.42□□□□□ -0.58
DDB1-216ENST00000539739 OR8A1Q8NGG7 326 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 OR10J6PQ8NGY7 276 aa11.42□□□□□ -0.58
DDB1-216ENST00000539739 YTHDF2Q9Y5A9 579 aaKnown RBP11.42□□□□□ -0.58
DDB1-216ENST00000539739 F6UB75 175 aa11.41□□□□□ -0.58
DDB1-216ENST00000539739 HLA-DRB4P13762 266 aa11.41□□□□□ -0.58
DDB1-216ENST00000539739 DEFB1P60022 68 aa11.41□□□□□ -0.58
DDB1-216ENST00000539739 DEFB121Q5J5C9 76 aa11.41□□□□□ -0.58
DDB1-216ENST00000539739 C5orf17Q8NAS9 161 aa11.41□□□□□ -0.58
DDB1-216ENST00000539739 HLA-DRB4X5D2U9 266 aa11.41□□□□□ -0.58
DDB1-216ENST00000539739 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
DDB1-216ENST00000539739 TRAV9-1A0A075B6T8 112 aa11.4□□□□□ -0.58
DDB1-216ENST00000539739 A8MZ25 164 aa11.4□□□□□ -0.58
DDB1-216ENST00000539739 GGTLC3B5MD39 225 aa11.4□□□□□ -0.58
DDB1-216ENST00000539739 H3BMM0 161 aa11.4□□□□□ -0.58
DDB1-216ENST00000539739 HIST1H1AQ02539 215 aaPredicted RBP11.4□□□□□ -0.58
DDB1-216ENST00000539739 SPATA45Q537H7 98 aa11.4□□□□□ -0.58
DDB1-216ENST00000539739 TXNDC17Q9BRA2 123 aa11.4□□□□□ -0.58
DDB1-216ENST00000539739 GAGE12BA1L429 117 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 TSPOP30536 169 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 PMCHL1Q16048 86 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 MRAPQ8TCY5 172 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 EPDR1Q9UM22 224 aa11.39□□□□□ -0.59
DDB1-216ENST00000539739 LOC102724200A0A096LPH7 203 aaPredicted RBP11.38□□□□□ -0.59
DDB1-216ENST00000539739 K7EQM0 130 aa11.38□□□□□ -0.59
DDB1-216ENST00000539739 PRB4P10163 310 aaPredicted RBP11.38□□□□□ -0.59
DDB1-216ENST00000539739 RBAKDNA6NC62 111 aa11.38□□□□□ -0.59
DDB1-216ENST00000539739 C11orf94C9JXX5 98 aa11.38□□□□□ -0.59
DDB1-216ENST00000539739 RPL35AP18077 110 aaKnown RBP11.38□□□□□ -0.59
DDB1-216ENST00000539739 ATP5G3P48201 142 aa11.38□□□□□ -0.59
DDB1-216ENST00000539739 TDRG1Q3Y452 100 aa11.38□□□□□ -0.59
DDB1-216ENST00000539739 Q6ZWC4 215 aa11.38□□□□□ -0.59
DDB1-216ENST00000539739 GTF2H5Q6ZYL4 71 aa11.38□□□□□ -0.59
DDB1-216ENST00000539739 TRPT1Q86TN4 253 aaKnown RBP11.38□□□□□ -0.59
DDB1-216ENST00000539739 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
DDB1-216ENST00000539739 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
DDB1-216ENST00000539739 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
DDB1-216ENST00000539739 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
DDB1-216ENST00000539739 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 TCRAP04437 139 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
DDB1-216ENST00000539739 BCL2P10415 239 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 GNG5P63218 68 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 TMEM78Q5T7P6 136 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 FER1L6-AS1Q8NA97 138 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 LINC00477Q96M19 166 aa11.37□□□□□ -0.59
DDB1-216ENST00000539739 FRMD6-AS1P0C7T7 363 aa11.36□□□□□ -0.59
DDB1-216ENST00000539739 APOC4P55056 127 aa11.36□□□□□ -0.59
DDB1-216ENST00000539739 Q0VG73 95 aa11.36□□□□□ -0.59
DDB1-216ENST00000539739 MORN3Q6PF18 240 aaPredicted RBP11.36□□□□□ -0.59
DDB1-216ENST00000539739 OR11H2Q8NH07 326 aa11.36□□□□□ -0.59
DDB1-216ENST00000539739 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
DDB1-216ENST00000539739 SPXQ9BT56 116 aa11.36□□□□□ -0.59
DDB1-216ENST00000539739 AGRNO00468 2067 aa11.36□□□□□ -0.59
DDB1-216ENST00000539739 NPIPB6E9PJ23 425 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 TMEM250H0YL14 139 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 PEX7O00628 323 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 MEF2BQ02080 365 aaPredicted RBP11.35□□□□□ -0.59
DDB1-216ENST00000539739 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 SFRP2Q96HF1 295 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 VGLL1Q99990 258 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 PGPEP1Q9NXJ5 209 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 A8MTW9 85 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 CRYBA4P53673 196 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 ERCC8Q13216 396 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 MRPL54Q6P161 138 aaKnown RBP11.35□□□□□ -0.59
DDB1-216ENST00000539739 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
DDB1-216ENST00000539739 KIR2DL5BQ8NHK3 375 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
DDB1-216ENST00000539739 FBLL1A6NHQ2 334 aaKnown RBP11.34□□□□□ -0.59
DDB1-216ENST00000539739 PDE6DO43924 150 aa11.34□□□□□ -0.59
DDB1-216ENST00000539739 ZNF138P52744 262 aa11.33□□□□□ -0.6
DDB1-216ENST00000539739 TMEM75Q8N9X5 138 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms