RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ADAT1Q9BUB4 502 aaKnown RBP2.54□□□□□ -2
AC055720.1-201ENST00000539552 RERGLQ9H628 205 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 CCDC167Q9P0B6 97 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 MARCOQ9UEW3 520 aaPredicted RBP2.54□□□□□ -2
AC055720.1-201ENST00000539552 LINC00588Q9Y4M8 146 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 TMEM14AQ9Y6G1 99 aa2.54□□□□□ -2
AC055720.1-201ENST00000539552 TNRC6AQ8NDV7 1962 aaKnown RBP2.54□□□□□ -2
AC055720.1-201ENST00000539552 ROS1P08922 2347 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 ABCA1O95477 2261 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 USF3Q68DE3 2245 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 MUC4Q99102 2169 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 DSCAML1Q8TD84 2053 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 SCN8AQ9UQD0 1980 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 IGKV1-9A0A0C4DH69 117 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 TRBV27A0A0K0K1C4 114 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 A0A1B0GVY2 172 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 BBIP1A8MTZ0 92 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 ZNF727A8MUV8 499 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 LEPROTO15243 131 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 NDUFB3O43676 98 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 KRASP01116 189 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 CXCL1P09341 107 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 ZNF286BP0CG31 522 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 CCL3P10147 92 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 CRHBPP24387 322 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 FXYD7P58549 80 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 BTG2P78543 158 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 CDK6Q00534 326 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 MEF2BQ02080 365 aaPredicted RBP2.53□□□□□ -2
AC055720.1-201ENST00000539552 PLGLB1Q02325 96 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 C9orf129Q5T035 196 aaKnown RBP2.53□□□□□ -2
AC055720.1-201ENST00000539552 C10orf91Q5T1B1 145 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 NCMAPQ5T1S8 102 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 C16orf47Q6ZP98 133 aaPredicted RBP2.53□□□□□ -2
AC055720.1-201ENST00000539552 ZNF101Q8IZC7 436 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 WFDC5Q8TCV5 224 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 GABARAPL1Q9H0R8 117 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 SNX12Q9UMY4 172 aa2.53□□□□□ -2
AC055720.1-201ENST00000539552 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 MYH1P12882 1939 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 DSPPQ9NZW4 1301 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 TRAV27A0A087WT01 109 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 FAM236AA0A1B0GUQ0 79 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 FAM236BA0A1B0GV22 79 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 FAM168BA1KXE4 195 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 A6NDX4 124 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 OR2T8A6NH00 312 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 A8MWV9 139 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 SLC25A20O43772 301 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 SH2D1AO60880 128 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 HRASP01112 189 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 HIST1H1BP16401 226 aaKnown RBP2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 HIST1H1DP16402 221 aaKnown RBP2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 RNASE4P34096 147 aaKnown RBP2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 ARPP19P56211 112 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 RHOGP84095 191 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 AKR1C1Q04828 323 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 HES1Q14469 280 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 HSD17B12Q53GQ0 312 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 MEIG1Q5JSS6 88 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 C22orf39Q6P5X5 142 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 RPS19BP1Q86WX3 136 aaKnown RBP2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 SNX29P2Q8IUI4 249 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 TEX29Q8N6K0 151 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 Q8N9W7 124 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 WFDC11Q8NEX6 87 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 OR5D14Q8NGL3 314 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 LINC01560Q8TB33 94 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 DEDD2Q8WXF8 326 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 MRPL57Q9BQC6 102 aaKnown RBP2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 NAA38Q9BRA0 125 aaKnown RBP2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 UPK3BQ9BT76 320 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 SPANXDQ9BXN6 97 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 BANF2Q9H503 90 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 MPC1Q9Y5U8 109 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 HCFC1P51610 2035 aa2.52□□□□□ -2.01
AC055720.1-201ENST00000539552 DNAH6Q9C0G6 4158 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 PCNX3Q9H6A9 2034 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 TRGV10A0A0A0MS01 117 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 C17orf51A8MQB3 221 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 A8MWP4 228 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 K7EM74 188 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 CDC42EP2O14613 210 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 SNAPC5O75971 98 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 HLA-DMBP28068 263 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 DIAPH2-AS1Q14236 149 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 LCN15Q6UWW0 184 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 ZNF767PQ75MW2 155 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 ADM2Q7Z4H4 148 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 MIR7-3HGQ8N6C7 128 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 IMMP1LQ96LU5 166 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 OSTCQ9NRP0 149 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 ZNF222Q9UK12 451 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 IER3IP1Q9Y5U9 82 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 SMAD5-AS1Q9Y6J3 95 aa2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 NUP210Q8TEM1 1887 aaPredicted RBP2.51□□□□□ -2.01
AC055720.1-201ENST00000539552 VPS13DQ5THJ4 4388 aa2.5□□□□□ -2.01
AC055720.1-201ENST00000539552 TRBV24-1A0A075B6N3 115 aa2.5□□□□□ -2.01
AC055720.1-201ENST00000539552 UQCRHLA0A096LP55 91 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms