RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 RNF222A6NCQ9 220 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 M0R2P5 195 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 CXorf1O96002 111 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 IQCF2Q8IXL9 164 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 ASB13Q8WXK3 278 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 SDF2L1Q9HCN8 221 aa13.06□□□□□ -0.32
TNFRSF1A-212ENST00000539372 TRAV4A0A0B4J268 109 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 SERTM2A0A1B0GWG4 89 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 K7EQD1 137 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 GYPEP15421 78 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 LINC00315P59091 139 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 SUMO1P63165 101 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 NEGR1Q7Z3B1 354 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 SPATA12Q7Z6I5 190 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 OR4C5Q8NGB2 326 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 TMEM167BQ9NRX6 74 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 TNFSF18Q9UNG2 199 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 PSG8Q9UQ74 426 aa13.05□□□□□ -0.32
TNFRSF1A-212ENST00000539372 SRIP30626 198 aa13.04□□□□□ -0.32
TNFRSF1A-212ENST00000539372 ZNF80P51504 273 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-212ENST00000539372 OR2T35Q8NGX2 323 aa13.04□□□□□ -0.32
TNFRSF1A-212ENST00000539372 BORCS7-ASMTA0A0B4J1R7 106 aa13.03□□□□□ -0.32
TNFRSF1A-212ENST00000539372 K7EQM0 130 aa13.03□□□□□ -0.32
TNFRSF1A-212ENST00000539372 IGLV2-11P01706 119 aa13.03□□□□□ -0.32
TNFRSF1A-212ENST00000539372 PRNTQ86SH4 94 aa13.03□□□□□ -0.32
TNFRSF1A-212ENST00000539372 KCNS1Q96KK3 526 aa13.03□□□□□ -0.32
TNFRSF1A-212ENST00000539372 C11orf21Q9P2W6 132 aa13.03□□□□□ -0.32
TNFRSF1A-212ENST00000539372 EPDR1Q9UM22 224 aa13.03□□□□□ -0.32
TNFRSF1A-212ENST00000539372 FLI1Q01543 452 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-212ENST00000539372 ZNF726P1Q15940 193 aa13.02□□□□□ -0.33
TNFRSF1A-212ENST00000539372 LOC100131303A0A0U1RQF7 123 aa13.01□□□□□ -0.33
TNFRSF1A-212ENST00000539372 C9JCJ5 164 aa13.01□□□□□ -0.33
TNFRSF1A-212ENST00000539372 GCGP01275 180 aa13.01□□□□□ -0.33
TNFRSF1A-212ENST00000539372 ORM1P02763 201 aa13.01□□□□□ -0.33
TNFRSF1A-212ENST00000539372 BTF3P20290 206 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-212ENST00000539372 CYB561D1Q8N8Q1 229 aa13.01□□□□□ -0.33
TNFRSF1A-212ENST00000539372 TMEM75Q8N9X5 138 aa13.01□□□□□ -0.33
TNFRSF1A-212ENST00000539372 G3V3Q6 166 aa13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 TAAR5O14804 337 aa13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 KRTAP10-2P60368 255 aa13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 RGS21Q2M5E4 152 aa13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 SMUG1Q53HV7 270 aa13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 Q6ZRN7 208 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 LINC00479Q96M42 142 aa13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 TNFRSF18Q9Y5U5 241 aa13□□□□□ -0.33
TNFRSF1A-212ENST00000539372 TRAV34A0A0B4J273 112 aa12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 CTXND1A0A1B0GTU2 59 aa12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 PFN1P07737 140 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 FGF8P55075 233 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 UBE2G2P60604 165 aa12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 ZFP69Q49AA0 526 aa12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 WFDC10BQ8IUB3 73 aa12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 TXNDC17Q9BRA2 123 aa12.99□□□□□ -0.33
TNFRSF1A-212ENST00000539372 A0A1W2PRE2 83 aa12.98□□□□□ -0.33
TNFRSF1A-212ENST00000539372 ZNF876PQ49A33 203 aa12.98□□□□□ -0.33
TNFRSF1A-212ENST00000539372 AKR1C8PQ5T2L2 129 aa12.98□□□□□ -0.33
TNFRSF1A-212ENST00000539372 LY96Q9Y6Y9 160 aa12.98□□□□□ -0.33
TNFRSF1A-212ENST00000539372 LRP1BQ9NZR2 4599 aa12.97□□□□□ -0.33
TNFRSF1A-212ENST00000539372 ARPC5O15511 151 aa12.97□□□□□ -0.33
TNFRSF1A-212ENST00000539372 IFNA7P01567 189 aa12.97□□□□□ -0.33
TNFRSF1A-212ENST00000539372 GATA1P15976 413 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-212ENST00000539372 DPPA3Q6W0C5 159 aa12.97□□□□□ -0.33
TNFRSF1A-212ENST00000539372 C9orf85Q96MD7 179 aa12.97□□□□□ -0.33
TNFRSF1A-212ENST00000539372 KRTAP4-5Q9BYR2 181 aa12.97□□□□□ -0.33
TNFRSF1A-212ENST00000539372 IGHV3-73A0A0B4J1V6 119 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 SMLR1H3BR10 107 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 CFAP126Q5VTH2 177 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 NHLRC2Q8NBF2 726 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 ARL2-SNX15V9GYD0 113 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 HSPG2P98160 4391 aa12.96□□□□□ -0.33
TNFRSF1A-212ENST00000539372 PCLOQ9Y6V0 5065 aa12.95□□□□□ -0.34
TNFRSF1A-212ENST00000539372 TRAV9-2A0A087WT02 112 aa12.95□□□□□ -0.34
TNFRSF1A-212ENST00000539372 RS1O15537 224 aa12.95□□□□□ -0.34
TNFRSF1A-212ENST00000539372 CYTL1Q9NRR1 136 aa12.95□□□□□ -0.34
TNFRSF1A-212ENST00000539372 RYR1P21817 5038 aa12.95□□□□□ -0.34
TNFRSF1A-212ENST00000539372 PGPEP1LA6NFU8 196 aa12.94□□□□□ -0.34
TNFRSF1A-212ENST00000539372 FAM74A7A6NL05 159 aa12.94□□□□□ -0.34
TNFRSF1A-212ENST00000539372 PEX7O00628 323 aa12.94□□□□□ -0.34
TNFRSF1A-212ENST00000539372 RNASE3P12724 160 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-212ENST00000539372 ZNF506Q5JVG8 444 aa12.94□□□□□ -0.34
TNFRSF1A-212ENST00000539372 SLC25A29Q8N8R3 303 aa12.94□□□□□ -0.34
TNFRSF1A-212ENST00000539372 EVI2AP22794 236 aa12.93□□□□□ -0.34
TNFRSF1A-212ENST00000539372 FUSP35637 526 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNFRSF1A-212ENST00000539372 PPT1P50897 306 aa12.93□□□□□ -0.34
TNFRSF1A-212ENST00000539372 IGKV3D-20A0A0C4DH25 116 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 DNAH10OSP0CZ25 163 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 SH2D6Q7Z4S9 175 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 Q86TA4 180 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 NFE4Q86UQ8 179 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 PRADC1Q9BSG0 188 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 MAP1LC3BQ9GZQ8 125 aa12.92□□□□□ -0.34
TNFRSF1A-212ENST00000539372 MSRB1Q9NZV6 116 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms