RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 CASP8AP2Q9UKL3 1982 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 PTPRDP23468 1912 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 GRIN2AQ12879 1464 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 TRAV17A0A0B4J275 112 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 J3QLW9 94 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 KLF7O75840 302 aaPredicted RBP1.27□□□□□ -2.21
SNHG1-210ENST00000539303 PPYP01298 95 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 IGF2P01344 180 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 IGHV3-33P01772 117 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 IL7P13232 177 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 ZNF25P17030 456 aaPredicted RBP1.27□□□□□ -2.21
SNHG1-210ENST00000539303 ADCYAP1P18509 176 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 KRTAP12-4P60329 112 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 SCIMPQ6UWF3 145 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 Q6ZUT4 128 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 TMEM203Q969S6 136 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 WFDC10AQ9H1F0 79 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 GNG8Q9UK08 70 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 UNC13CQ8NB66 2214 aa1.27□□□□□ -2.21
SNHG1-210ENST00000539303 MYO18AQ92614 2054 aaKnown RBP1.27□□□□□ -2.21
SNHG1-210ENST00000539303 TNRC6BQ9UPQ9 1833 aaKnown RBP1.26□□□□□ -2.21
SNHG1-210ENST00000539303 IGKV3D-7A0A0C4DH55 119 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 IGKV3OR2-268A0A0C4DH90 116 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 JMJD7-PLA2G4BH0Y9G9 81 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 INE1O15225 51 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 HCRTO43612 131 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 IFNGP01579 166 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 PRB4P10163 310 aaPredicted RBP1.26□□□□□ -2.21
SNHG1-210ENST00000539303 POLR2JP52435 117 aaKnown RBP1.26□□□□□ -2.21
SNHG1-210ENST00000539303 WHAMMP3Q1A5X7 153 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 SPRNQ5BIV9 151 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 MEIG1Q5JSS6 88 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 DPH3Q96FX2 82 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 PDCD10Q9BUL8 212 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 TAS2R8Q9NYW2 309 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 KIDINS220Q9ULH0 1771 aa1.26□□□□□ -2.21
SNHG1-210ENST00000539303 TMEM2Q9UHN6 1383 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 TRAV23DV6A0A075B6W5 121 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 LOC110117498A0A087WWA1 95 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 TRBV6-7A0A0A0MS04 114 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 TMEM30CPA0ZSE6 113 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 M0R2N4 97 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 APODP05090 189 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 S100A1P23297 94 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 RHOHQ15669 191 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 IQCJQ1A5X6 159 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 LINC01545Q5VT33 79 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 UNQ5815/PRO19632Q6UWF5 114 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 LINC00322Q6ZN03 302 aaPredicted RBP1.25□□□□□ -2.21
SNHG1-210ENST00000539303 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.25□□□□□ -2.21
SNHG1-210ENST00000539303 VSTM2AQ8TAG5 236 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 DYNLRB2Q8TF09 96 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 LIMD2Q9BT23 127 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 ZFP30Q9Y2G7 519 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 NALCNQ8IZF0 1738 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 WDR97A6NE52 1622 aa1.25□□□□□ -2.21
SNHG1-210ENST00000539303 UHRF1BP1LA0JNW5 1464 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 MYOM3Q5VTT5 1437 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 SMG6Q86US8 1419 aaKnown RBP1.24□□□□□ -2.21
SNHG1-210ENST00000539303 IGKV3-7A0A075B6H7 116 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 TRAV12-2A0A075B6T6 113 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 IGLV3-32A0A0A0MS00 114 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 F6UZH7 168 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 PITX3O75364 302 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 IGKCP01834 107 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 AKAIN1P0CW23 69 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 HIST1H1DP16402 221 aaKnown RBP1.24□□□□□ -2.21
SNHG1-210ENST00000539303 CSAG1Q6PB30 78 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 UNQ6190/PRO20217Q6UXQ8 127 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 LINC00299Q6ZSB3 139 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 COPS9Q8WXC6 57 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 CASZ1Q86V15 1759 aa1.24□□□□□ -2.21
SNHG1-210ENST00000539303 NAIPQ13075 1403 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 ERBINQ96RT1 1412 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 MCM3APO60318 1980 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 IGKV2-40A0A087WW87 121 aaPredicted RBP1.23□□□□□ -2.21
SNHG1-210ENST00000539303 LOC100130705A0A1B0GUX0 176 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 SNAPC5O75971 98 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 IGKV2D-40P01614 121 aaPredicted RBP1.23□□□□□ -2.21
SNHG1-210ENST00000539303 FGF7P21781 194 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 S100PP25815 95 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 GDF5OSQ5U4N7 250 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 LYPD5Q6UWN5 251 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 SPTSSAQ969W0 71 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 SEC11CQ9BY50 192 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 CYSTM1Q9H1C7 97 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 SCN3BQ9NY72 215 aa1.23□□□□□ -2.21
SNHG1-210ENST00000539303 MRPL36Q9P0J6 103 aaKnown RBP1.23□□□□□ -2.21
SNHG1-210ENST00000539303 BOKQ9UMX3 212 aaPredicted RBP1.23□□□□□ -2.21
SNHG1-210ENST00000539303 LRP5O75197 1615 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 TRAV2A0A0B4J234 112 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 A0A0J9YY99 117 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 MIF4GDA9UHW6 222 aaKnown RBP1.22□□□□□ -2.21
SNHG1-210ENST00000539303 SNCGO76070 127 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 TFF1P04155 84 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 IL5P05113 134 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 GYPBP06028 91 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 IL9P15248 144 aa1.22□□□□□ -2.21
SNHG1-210ENST00000539303 MRPS10P82664 201 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms