RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 LINC01619G3V211 115 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 SCGB1D1O95968 90 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 FXYD7P58549 80 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 JOSD1Q15040 202 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-205ENST00000538545 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 NIT1Q86X76 327 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 ATRQ13535 2644 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 LOC389332A0A1B0GUA5 103 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 GNRH2O43555 120 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 KCNS1Q96KK3 526 aa10.57□□□□□ -0.72
ACTN1-205ENST00000538545 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 D6R8Y8 96 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 TDRG1Q3Y452 100 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 BORCS7Q96B45 105 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 RAX2Q96IS3 184 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
ACTN1-205ENST00000538545 OVOL1O14753 267 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 GATA1P15976 413 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-205ENST00000538545 KRTDAPP60985 99 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 REC114Q7Z4M0 266 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 TMEM61Q8N0U2 210 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 TMEM86BQ8N661 226 aa10.56□□□□□ -0.72
ACTN1-205ENST00000538545 K7EQG2 157 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 ZNF324O75467 553 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-205ENST00000538545 EVI2AP22794 236 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 C4orf3Q8WVX3 66 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 LINC00477Q96M19 166 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 TRAV12-3A0A0B4J271 114 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 KNCNA6PVL3 124 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 LINC00173Q6ZV60 143 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
ACTN1-205ENST00000538545 LINC00587B1AMM8 73 aa10.54□□□□□ -0.72
ACTN1-205ENST00000538545 LGALS9O00182 355 aa10.54□□□□□ -0.72
ACTN1-205ENST00000538545 HSBP1O75506 76 aa10.54□□□□□ -0.72
ACTN1-205ENST00000538545 PRM2P04554 102 aa10.54□□□□□ -0.72
ACTN1-205ENST00000538545 ESDP10768 282 aa10.54□□□□□ -0.72
ACTN1-205ENST00000538545 CTRLP40313 264 aa10.54□□□□□ -0.72
ACTN1-205ENST00000538545 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
ACTN1-205ENST00000538545 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
ACTN1-205ENST00000538545 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 ID1P41134 155 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 TRRAPQ9Y4A5 3859 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 M0R381 172 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 Q6AWC8 147 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
ACTN1-205ENST00000538545 DEFB131AP59861 70 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
ACTN1-205ENST00000538545 RNASE1P07998 156 aaKnown RBP10.52□□□□□ -0.73
ACTN1-205ENST00000538545 BTF3P20290 206 aaKnown RBP10.52□□□□□ -0.73
ACTN1-205ENST00000538545 APRG1Q8IVJ8 170 aa10.52□□□□□ -0.73
ACTN1-205ENST00000538545 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-205ENST00000538545 RPS20P60866 119 aaKnown RBP10.52□□□□□ -0.73
ACTN1-205ENST00000538545 SNRPD3P62318 126 aaKnown RBP10.52□□□□□ -0.73
ACTN1-205ENST00000538545 CD300EQ496F6 205 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-205ENST00000538545 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
ACTN1-205ENST00000538545 A0A0J9YX75 114 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 NPYP01303 97 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 HILS1P60008 231 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 PAFAH1B2P68402 229 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 ZNF493Q6ZR52 646 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 ATOH7Q8N100 152 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 ZNF664Q8N3J9 261 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 TEX29Q8N6K0 151 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-205ENST00000538545 HTN1P15515 57 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 SPANXN1Q5VSR9 72 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 PPP1R14DQ9NXH3 145 aa10.51□□□□□ -0.73
ACTN1-205ENST00000538545 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 CCL24O00175 119 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 C3orf79P0CE67 100 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 S100A4P26447 101 aaKnown RBP10.5□□□□□ -0.73
ACTN1-205ENST00000538545 EBLN2Q6P2I7 272 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 IGHV1-24A0A0C4DH33 117 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 LINC00614P0C842 121 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 CKS2P33552 79 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 DYNLRB2Q8TF09 96 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 PRELID3AQ96N28 172 aa10.5□□□□□ -0.73
ACTN1-205ENST00000538545 H0Y8G0 127 aa10.49□□□□□ -0.73
ACTN1-205ENST00000538545 RAB4AP20338 218 aa10.49□□□□□ -0.73
ACTN1-205ENST00000538545 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
ACTN1-205ENST00000538545 JPT2Q9H910 190 aa10.49□□□□□ -0.73
ACTN1-205ENST00000538545 LENEPQ9Y5L5 61 aa10.49□□□□□ -0.73
ACTN1-205ENST00000538545 KLLNB2CW77 178 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 KRTAP10-3P60369 221 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 Q8N976 141 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 RNASE3P12724 160 aaKnown RBP10.48□□□□□ -0.73
ACTN1-205ENST00000538545 DMRTA1Q5VZB9 504 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 GATD1Q8NB37 220 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 SIGLEC8Q9NYZ4 499 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 DEFB114Q30KQ6 69 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 MAJINQ3KP22 176 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 LURAP1LQ8IV03 231 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
ACTN1-205ENST00000538545 PRSS3P2Q8NHM4 247 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms