RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 Q6ZQT7 251 aa13.21□□□□□ -0.3
SCARB1-205ENST00000538291 C11orf52Q96A22 123 aa13.21□□□□□ -0.3
SCARB1-205ENST00000538291 MGAMO43451 1857 aa13.21□□□□□ -0.3
SCARB1-205ENST00000538291 J3QQQ9 107 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 PRR20EP86478 221 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 PRR20CP86479 221 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 PRR20DP86480 221 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 PRR20BP86481 221 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 PRR20AP86496 221 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 FGF6P10767 208 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
SCARB1-205ENST00000538291 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 ARTNQ5T4W7 220 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
SCARB1-205ENST00000538291 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 MALRD1Q5VYJ5 2156 aa13.2□□□□□ -0.3
SCARB1-205ENST00000538291 ATP5G1P05496 136 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 C11orf53Q8IXP5 236 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 C10orf105Q8TEF2 133 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 CFHR4Q92496 578 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 LTAP01374 205 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 C17orf77Q96MU5 243 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 UTF1Q5T230 341 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 ICOSQ9Y6W8 199 aa13.19□□□□□ -0.3
SCARB1-205ENST00000538291 C16orf74Q96GX8 76 aa13.18□□□□□ -0.3
SCARB1-205ENST00000538291 GTSF1LQ9H1H1 148 aa13.18□□□□□ -0.3
SCARB1-205ENST00000538291 C20orf144Q9BQM9 153 aa13.18□□□□□ -0.3
SCARB1-205ENST00000538291 SH2D6Q7Z4S9 175 aa13.18□□□□□ -0.3
SCARB1-205ENST00000538291 PRO1854Q9UHT4 67 aa13.18□□□□□ -0.3
SCARB1-205ENST00000538291 NPBQ8NG41 125 aa13.17□□□□□ -0.3
SCARB1-205ENST00000538291 POLR3KQ9Y2Y1 108 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-205ENST00000538291 RLFQ13129 1914 aa13.17□□□□□ -0.3
SCARB1-205ENST00000538291 WIPF2Q8TF74 440 aaPredicted RBP13.17□□□□□ -0.3
SCARB1-205ENST00000538291 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
SCARB1-205ENST00000538291 AJUBAQ96IF1 538 aa13.17□□□□□ -0.3
SCARB1-205ENST00000538291 MED13LQ71F56 2210 aa13.17□□□□□ -0.3
SCARB1-205ENST00000538291 KIAA1671Q9BY89 1806 aa13.17□□□□□ -0.3
SCARB1-205ENST00000538291 BLCAPP62952 87 aa13.17□□□□□ -0.3
SCARB1-205ENST00000538291 BUB3O43684 328 aa13.16□□□□□ -0.3
SCARB1-205ENST00000538291 CRYGCP07315 174 aa13.16□□□□□ -0.3
SCARB1-205ENST00000538291 COX11Q9Y6N1 276 aa13.16□□□□□ -0.3
SCARB1-205ENST00000538291 PTPRDP23468 1912 aa13.16□□□□□ -0.3
SCARB1-205ENST00000538291 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-205ENST00000538291 IGKV2-29A2NJV5 120 aaPredicted RBP13.16□□□□□ -0.3
SCARB1-205ENST00000538291 K7EMI3 77 aa13.15□□□□□ -0.3
SCARB1-205ENST00000538291 GYPEP15421 78 aa13.15□□□□□ -0.3
SCARB1-205ENST00000538291 SLC25A29Q8N8R3 303 aa13.15□□□□□ -0.3
SCARB1-205ENST00000538291 Q8NFD4 153 aa13.15□□□□□ -0.3
SCARB1-205ENST00000538291 EGR2P11161 476 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-205ENST00000538291 ATP6V0E2Q8NHE4 81 aa13.15□□□□□ -0.3
SCARB1-205ENST00000538291 COX8AP10176 69 aa13.15□□□□□ -0.3
SCARB1-205ENST00000538291 DAZAP2Q15038 168 aaPredicted RBP13.15□□□□□ -0.3
SCARB1-205ENST00000538291 BOD1L2Q8IYS8 172 aa13.15□□□□□ -0.3
SCARB1-205ENST00000538291 ADORA2A-AS1P86434 159 aa13.14□□□□□ -0.31
SCARB1-205ENST00000538291 GTF3C1Q12789 2109 aa13.14□□□□□ -0.31
SCARB1-205ENST00000538291 RPL18AQ02543 176 aaKnown RBP13.14□□□□□ -0.31
SCARB1-205ENST00000538291 hADV29S1A0JD25 119 aa13.14□□□□□ -0.31
SCARB1-205ENST00000538291 IGHG4P01861 327 aa13.14□□□□□ -0.31
SCARB1-205ENST00000538291 CAMK2N2Q96S95 79 aa13.14□□□□□ -0.31
SCARB1-205ENST00000538291 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
SCARB1-205ENST00000538291 PPDPFLQ8WWR9 84 aa13.13□□□□□ -0.31
SCARB1-205ENST00000538291 ETDCA0A1B0GVM5 59 aa13.13□□□□□ -0.31
SCARB1-205ENST00000538291 C9orf118A6NHY6 69 aa13.13□□□□□ -0.31
SCARB1-205ENST00000538291 ZNF124Q15973 351 aa13.13□□□□□ -0.31
SCARB1-205ENST00000538291 SPRNQ5BIV9 151 aa13.13□□□□□ -0.31
SCARB1-205ENST00000538291 C5orf38Q86SI9 138 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 ZNF503Q96F45 646 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 CARD19Q96LW7 228 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-205ENST00000538291 Q9H8V8 135 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 NRGNQ92686 78 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-205ENST00000538291 K7EQD1 137 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 HERV-K104P63124 156 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 IGFBPL1Q8WX77 278 aa13.12□□□□□ -0.31
SCARB1-205ENST00000538291 IGLV11-55A0A075B6I3 123 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 WDR81Q562E7 1941 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 IGLC2P0DOY2 106 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 PTPRQQ9UMZ3 2332 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 I3L2K1 104 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 NDUFS5O43920 106 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 MYCNOSP40205 109 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 ASPHD1Q5U4P2 390 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 CEND1Q8N111 149 aa13.11□□□□□ -0.31
SCARB1-205ENST00000538291 TIRAPP58753 221 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 Q6ZWC4 215 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 DEFB105AQ8NG35 78 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 PLXNA4Q9HCM2 1894 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 C9orf153Q5TBE3 101 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 ZGRF1Q86YA3 2104 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 MUC6Q6W4X9 2439 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 IGHV3-30P01768 117 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 IGHV3-33P01772 117 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 IGHV3-30-5P0DP03 117 aa13.1□□□□□ -0.31
SCARB1-205ENST00000538291 K7EIM0 57 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms