RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 IGFL4Q6B9Z1 124 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 SCGB1D4Q6XE38 83 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 FAM19A5Q7Z5A7 132 aaPredicted RBP8.28□□□□□ -1.08
RTN3-208ENST00000537981 FAM57AQ8TBR7 257 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 PRADC1Q9BSG0 188 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 SLC25A39Q9BZJ4 359 aaPredicted RBP8.28□□□□□ -1.08
RTN3-208ENST00000537981 ARHGAP32A7KAX9 2087 aa8.27□□□□□ -1.09
RTN3-208ENST00000537981 ATP5LO75964 103 aa8.27□□□□□ -1.09
RTN3-208ENST00000537981 CGB3P0DN86 165 aa8.27□□□□□ -1.09
RTN3-208ENST00000537981 CGB7P0DN87 165 aa8.27□□□□□ -1.09
RTN3-208ENST00000537981 ZNF672Q499Z4 452 aaPredicted RBP8.27□□□□□ -1.09
RTN3-208ENST00000537981 MBD3L2Q8NHZ7 208 aaPredicted RBP8.27□□□□□ -1.09
RTN3-208ENST00000537981 SAP25Q8TEE9 199 aa8.27□□□□□ -1.09
RTN3-208ENST00000537981 IGHV5-10-1A0A0J9YXX1 117 aa8.27□□□□□ -1.09
RTN3-208ENST00000537981 MRPS12O15235 138 aaKnown RBP8.27□□□□□ -1.09
RTN3-208ENST00000537981 LINC01546A6NGU7 62 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 EDA2RQ9HAV5 297 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 TPRP12270 2363 aaKnown RBP8.26□□□□□ -1.09
RTN3-208ENST00000537981 DCHS2Q6V1P9 2916 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 BAALCQ8WXS3 180 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 CXXC4Q9H2H0 198 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 HIGD1AQ9Y241 93 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 X6R8D5 127 aa8.26□□□□□ -1.09
RTN3-208ENST00000537981 TRBV19A0A075B6N1 114 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 ASIPP42127 132 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 NXPH1P58417 271 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 TNP2Q05952 138 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 PRR30Q53SZ7 412 aaPredicted RBP8.25□□□□□ -1.09
RTN3-208ENST00000537981 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 PRR25Q96S07 402 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 MSMPQ1L6U9 139 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 DEFB108BQ8NET1 73 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 OR10J6PQ8NGY7 276 aa8.25□□□□□ -1.09
RTN3-208ENST00000537981 SPRY2O43597 315 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 IGHV4-39P01824 125 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 COX6B1P14854 86 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 ZNF56Q15929 161 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 MRGPRG-AS1Q2M3A8 158 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 Q6Q795 121 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 DTX2Q86UW9 622 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 MYOZ3Q8TDC0 251 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 ASH1LQ9NR48 2969 aaKnown RBP8.24□□□□□ -1.09
RTN3-208ENST00000537981 S4R3C0 116 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 MAP1BP46821 2468 aaKnown RBP8.24□□□□□ -1.09
RTN3-208ENST00000537981 MALRD1Q5VYJ5 2156 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 IGHV3-72A0A0B4J1Y9 119 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 TRAV8-4A0A0B4J246 113 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 IGLV3-19P01714 112 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 HLA-DMBP28068 263 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
RTN3-208ENST00000537981 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
RTN3-208ENST00000537981 TRAV2A0A0B4J234 112 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 F5H768 121 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 F8VRH5 84 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 LINC01619G3V211 115 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 IGLC6P0CF74 106 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
RTN3-208ENST00000537981 IL17RELQ6ZVW7 336 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 Q8N8P6 123 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 DUX3Q96PT4 197 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 NXT2Q9NPJ8 142 aaKnown RBP8.23□□□□□ -1.09
RTN3-208ENST00000537981 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 TIMM23O14925 209 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 CCL4P13236 92 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 ZNF22P17026 224 aaPredicted RBP8.23□□□□□ -1.09
RTN3-208ENST00000537981 WT1P19544 449 aaPredicted RBP8.23□□□□□ -1.09
RTN3-208ENST00000537981 PLNP26678 52 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 CNTFRP26992 372 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 C10orf126Q8N4M7 172 aa8.23□□□□□ -1.09
RTN3-208ENST00000537981 WNK2Q9Y3S1 2297 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 RBAKDNA6NC62 111 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 USP17L23D6RBM5 183 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 INS-IGF2F8WCM5 200 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 IGHG4P01861 327 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 C6orf226Q5I0X4 101 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 A0A0J9YY99 117 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 SRRM5B3KS81 715 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 TM4SF5O14894 197 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 DUSP14O95147 198 aaKnown RBP8.22□□□□□ -1.09
RTN3-208ENST00000537981 IGLV2-23P01705 113 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 ORM1P02763 201 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 HERVK_113P63121 156 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 LAGE3Q14657 143 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 FAM216BQ8N7L0 139 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 NRACQ8N912 160 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 TMEM126AQ9H061 195 aa8.22□□□□□ -1.09
RTN3-208ENST00000537981 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 H7C1H1 209 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 NPFFO15130 113 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 IGHV3-30P01768 117 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 IGHV3-30-5P0DP03 117 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 IGHV1-2P23083 117 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 SPANXA1Q9NS26 97 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 NCOR2Q9Y618 2525 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 LRBAP50851 2863 aa8.21□□□□□ -1.1
RTN3-208ENST00000537981 TRBV6-1A0A0K0K1D8 114 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms