RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 GAGE7O76087 117 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 GPX1P07203 203 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 GAGE12FP0CL80 117 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 GAGE12GP0CL81 117 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 GAGE12IP0CL82 117 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 RNASE4P34096 147 aaKnown RBP4.91□□□□□ -1.62
YBX3-206ENST00000536823 RAB2AP61019 212 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 RANP62826 216 aaKnown RBP4.91□□□□□ -1.62
YBX3-206ENST00000536823 ZNF266Q14584 549 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 LGALS9BQ3B8N2 356 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 LINC00336Q6ZUF6 198 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 EIF4E3Q8N5X7 224 aaKnown RBP4.91□□□□□ -1.62
YBX3-206ENST00000536823 C11orf72Q8NBR9 251 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 OR2G3Q8NGZ4 309 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 Q8TAT8 98 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 OTORQ9NRC9 128 aa4.91□□□□□ -1.62
YBX3-206ENST00000536823 IGLV2-18A0A075B6J9 118 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 IGHV1OR15-1A0A075B7D0 117 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 A0A1W2PPV4 95 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 M0R2N4 97 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 EIF3GO75821 320 aaKnown RBP eCLIP4.9□□□□□ -1.63
YBX3-206ENST00000536823 CDC34P49427 236 aaPredicted RBP4.9□□□□□ -1.63
YBX3-206ENST00000536823 TCL1AP56279 114 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 Q5BKY6 102 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 IBA57Q5T440 356 aaKnown RBP4.9□□□□□ -1.63
YBX3-206ENST00000536823 Q6ZR54 194 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 Q6ZTI0 123 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 HSD17B11Q8NBQ5 300 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 OR10G4Q8NGN3 311 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 OR10G9Q8NGN4 311 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 OR10G7Q8NGN6 311 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 ATG101Q9BSB4 218 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 PSMG3Q9BT73 122 aaPredicted RBP4.9□□□□□ -1.63
YBX3-206ENST00000536823 GSN-AS1Q9NRJ2 163 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 LENEPQ9Y5L5 61 aa4.9□□□□□ -1.63
YBX3-206ENST00000536823 DNAH11Q96DT5 4516 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 TRAV26-1A0A087WT03 109 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 FXYD6-FXYD2A0A087WZ82 144 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 TRGV1A0A0A0MS02 117 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 RNF222A6NCQ9 220 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 PGPA6NDG6 321 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 RTL8CO15255 209 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 ARL14EPLP0DKL9 152 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 ATP6V0CP27449 155 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 SERF2P84101 59 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 RGS21Q2M5E4 152 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 FAM74A1Q5RGS3 127 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 Q6AWC8 147 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 Q6ZQT7 251 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 GOLT1AQ6ZVE7 132 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 ARL6IP6Q8N6S5 226 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 CMTM2Q8TAZ6 248 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 RXFP4Q8TDU9 374 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 TMED6Q8WW62 240 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 GNPNAT1Q96EK6 184 aaPredicted RBP4.89□□□□□ -1.63
YBX3-206ENST00000536823 HYLS1Q96M11 299 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 C18orf15Q96N68 181 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 HERC2O95714 4834 aa4.89□□□□□ -1.63
YBX3-206ENST00000536823 DYNC1H1Q14204 4646 aaKnown RBP4.88□□□□□ -1.63
YBX3-206ENST00000536823 PKD1P98161 4303 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 TRGV2A0A075B6R0 118 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 H3BNG1 76 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 HMGB3O15347 200 aaKnown RBP4.88□□□□□ -1.63
YBX3-206ENST00000536823 SPINK4O60575 86 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 MBP02144 154 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 STAG3L2P0CL84 134 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 STAG3L3P0CL85 134 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 GCHFRP30047 84 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 CCL18P55774 89 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 ZNF415Q09FC8 603 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 OR5I1Q13606 314 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 INO80EQ8NBZ0 244 aaPredicted RBP4.88□□□□□ -1.63
YBX3-206ENST00000536823 OR2T35Q8NGX2 323 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 ZNRF2Q8NHG8 242 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 SUN5Q8TC36 379 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 SH3BGRL3Q9H299 93 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 TP53TG3Q9ULZ0 132 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 RPH3ALQ9UNE2 315 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 TNFSF18Q9UNG2 199 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 KLF12Q9Y4X4 402 aa4.88□□□□□ -1.63
YBX3-206ENST00000536823 TRAV8-1A0A0A6YYK1 113 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 BORCS7-ASMTA0A0B4J1R7 106 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 A0A0J9YY99 117 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 SERTM2A0A1B0GWG4 89 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 G3V3Q6 166 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 GNG5P63218 68 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 SOHLH1Q5JUK2 328 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 MUC21Q5SSG8 566 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 RPL7L1Q6DKI1 246 aaKnown RBP4.87□□□□□ -1.63
YBX3-206ENST00000536823 C5orf17Q8NAS9 161 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 ST6GAL2Q96JF0 529 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 MRPL16Q9NX20 251 aaKnown RBP4.87□□□□□ -1.63
YBX3-206ENST00000536823 LINC00588Q9Y4M8 146 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 KIAA1109Q2LD37 5005 aa4.87□□□□□ -1.63
YBX3-206ENST00000536823 TRAV21A0A0B4J279 112 aa4.86□□□□□ -1.63
YBX3-206ENST00000536823 NBDYA0A0U1RRE5 68 aa4.86□□□□□ -1.63
YBX3-206ENST00000536823 GGTLC3B5MD39 225 aa4.86□□□□□ -1.63
YBX3-206ENST00000536823 F6UZH7 168 aa4.86□□□□□ -1.63
YBX3-206ENST00000536823 CXorf1O96002 111 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms