RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 ZNF726P1Q15940 193 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 C9orf47Q6ZRZ4 202 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 TMEM263Q8WUH6 116 aaKnown RBP7.75□□□□□ -1.17
LMO3-213ENST00000536172 Q9H8V8 135 aa7.75□□□□□ -1.17
LMO3-213ENST00000536172 TRAV12-2A0A075B6T6 113 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 TRBV7-9A0A0J9YWB2 115 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 FAM74A7A6NL05 159 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 PRAC2D3DTV9 90 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 H3BNG1 76 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 H7BYZ3 331 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 RGS13O14921 159 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 TCRAP04437 139 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 PRM2P04554 102 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 CT45A10P0DMU9 189 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 AZU1P20160 251 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 AKR1C3P42330 323 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 SPATA12Q7Z6I5 190 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 UPK3BQ9BT76 320 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 TREM1Q9NP99 234 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 ZNF492Q9P255 531 aa7.74□□□□□ -1.17
LMO3-213ENST00000536172 HSPG2P98160 4391 aa7.73□□□□□ -1.17
LMO3-213ENST00000536172 PEX7O00628 323 aa7.73□□□□□ -1.17
LMO3-213ENST00000536172 PDE6DO43924 150 aa7.73□□□□□ -1.17
LMO3-213ENST00000536172 FLI1Q01543 452 aaPredicted RBP7.73□□□□□ -1.17
LMO3-213ENST00000536172 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
LMO3-213ENST00000536172 RNASE8Q8TDE3 154 aaKnown RBP7.73□□□□□ -1.17
LMO3-213ENST00000536172 FMC1Q96HJ9 113 aa7.73□□□□□ -1.17
LMO3-213ENST00000536172 VGLL1Q99990 258 aa7.73□□□□□ -1.17
LMO3-213ENST00000536172 EIF5A2Q9GZV4 153 aaKnown RBP7.73□□□□□ -1.17
LMO3-213ENST00000536172 TRAV12-3A0A0B4J271 114 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 C7orf71A4D174 169 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 GNG5P63218 68 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 SMUG1Q53HV7 270 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 TEX261Q6UWH6 196 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 FAM159AQ6UWV7 190 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 TMEM75Q8N9X5 138 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 NOP10Q9NPE3 64 aaKnown RBP7.72□□□□□ -1.17
LMO3-213ENST00000536172 SCRT2Q9NQ03 307 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 VAX2Q9UIW0 290 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 PSG8Q9UQ74 426 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 ZFP30Q9Y2G7 519 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 ABCA13Q86UQ4 5058 aa7.72□□□□□ -1.17
LMO3-213ENST00000536172 TRAV26-1A0A087WT03 109 aa7.71□□□□□ -1.18
LMO3-213ENST00000536172 TRAV21A0A0B4J279 112 aa7.71□□□□□ -1.18
LMO3-213ENST00000536172 GGTLC3B5MD39 225 aa7.71□□□□□ -1.18
LMO3-213ENST00000536172 PRB4P10163 310 aaPredicted RBP7.71□□□□□ -1.18
LMO3-213ENST00000536172 OR5I1Q13606 314 aa7.71□□□□□ -1.18
LMO3-213ENST00000536172 LINC00612Q8N6U2 182 aa7.71□□□□□ -1.18
LMO3-213ENST00000536172 PYGO2Q9BRQ0 406 aa7.71□□□□□ -1.18
LMO3-213ENST00000536172 BIN3Q9NQY0 253 aa7.71□□□□□ -1.18
LMO3-213ENST00000536172 SNURFLB1AK76 121 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 BCL2P10415 239 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 MEF2BQ02080 365 aaPredicted RBP7.7□□□□□ -1.18
LMO3-213ENST00000536172 ZNF680Q8NEM1 530 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 Q8TAT8 98 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 DAZAP1Q96EP5 407 aaKnown RBP7.7□□□□□ -1.18
LMO3-213ENST00000536172 KCNS1Q96KK3 526 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 SGK494Q96LW2 274 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 MED9Q9NWA0 146 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 NAGKQ9UJ70 344 aa7.7□□□□□ -1.18
LMO3-213ENST00000536172 MRPS16Q9Y3D3 137 aaKnown RBP7.7□□□□□ -1.18
LMO3-213ENST00000536172 RBFOX3A6NFN3 312 aa7.69□□□□□ -1.18
LMO3-213ENST00000536172 CRISP2P16562 243 aa7.69□□□□□ -1.18
LMO3-213ENST00000536172 CEBPGP53567 150 aa7.69□□□□□ -1.18
LMO3-213ENST00000536172 GFI1BQ5VTD9 330 aa7.69□□□□□ -1.18
LMO3-213ENST00000536172 TRGV11A0A075B6L2 103 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 TRAV8-1A0A0A6YYK1 113 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 TRAV34A0A0B4J273 112 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 FABP5P3A8MUU1 101 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 CCL20P78556 96 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 PEA15Q15121 130 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 TMEM183BQ1AE95 376 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 ESRGQ1W209 222 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 EIF4E3Q8N5X7 224 aaKnown RBP7.68□□□□□ -1.18
LMO3-213ENST00000536172 KRTAP1-5Q9BYS1 174 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 SDF2L1Q9HCN8 221 aa7.68□□□□□ -1.18
LMO3-213ENST00000536172 IGHV1OR15-1A0A075B7D0 117 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 KLLNB2CW77 178 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 EREGO14944 169 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 GCGP01275 180 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 S100A4P26447 101 aaKnown RBP7.67□□□□□ -1.18
LMO3-213ENST00000536172 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 DAZ2Q13117 558 aaKnown RBP7.67□□□□□ -1.18
LMO3-213ENST00000536172 BTN1A1Q13410 526 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 CDPF1Q6NVV7 123 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 C18orf15Q96N68 181 aa7.67□□□□□ -1.18
LMO3-213ENST00000536172 A0A0J9YY99 117 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 SCO2A0A1W2PP80 73 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 GAGE12BA1L429 117 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 EPM2AB3EWF7 344 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 GAGE7O76087 117 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 ORM1P02763 201 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 PFN1P07737 140 aaKnown RBP7.66□□□□□ -1.18
LMO3-213ENST00000536172 GAGE12FP0CL80 117 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 GAGE12GP0CL81 117 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 GAGE12IP0CL82 117 aa7.66□□□□□ -1.18
LMO3-213ENST00000536172 MGST1P10620 155 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms