RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 RBFOX3A6NFN3 312 aa17.2■□□□□ 0.34
SIPA1-210ENST00000534406 DEFB130BP0DP73 79 aa17.2■□□□□ 0.34
SIPA1-210ENST00000534406 DEFB130AP0DP74 79 aa17.2■□□□□ 0.34
SIPA1-210ENST00000534406 BAGE2Q86Y30 109 aa17.2■□□□□ 0.34
SIPA1-210ENST00000534406 FABP5P3A8MUU1 101 aa17.19■□□□□ 0.34
SIPA1-210ENST00000534406 ZNF506Q5JVG8 444 aa17.19■□□□□ 0.34
SIPA1-210ENST00000534406 FAM162BQ5T6X4 162 aa17.19■□□□□ 0.34
SIPA1-210ENST00000534406 NHLRC2Q8NBF2 726 aa17.19■□□□□ 0.34
SIPA1-210ENST00000534406 MED9Q9NWA0 146 aa17.19■□□□□ 0.34
SIPA1-210ENST00000534406 C11orf21Q9P2W6 132 aa17.19■□□□□ 0.34
SIPA1-210ENST00000534406 TENM2Q9NT68 2774 aa17.18■□□□□ 0.34
SIPA1-210ENST00000534406 DEFB131BA0A096LNP1 70 aa17.18■□□□□ 0.34
SIPA1-210ENST00000534406 TYMSP04818 313 aa17.18■□□□□ 0.34
SIPA1-210ENST00000534406 TOR2AQ5JU69 321 aa17.18■□□□□ 0.34
SIPA1-210ENST00000534406 PCNPQ8WW12 178 aaKnown RBP17.18■□□□□ 0.34
SIPA1-210ENST00000534406 SH2D1AO60880 128 aa17.17■□□□□ 0.34
SIPA1-210ENST00000534406 CENPWQ5EE01 88 aa17.17■□□□□ 0.34
SIPA1-210ENST00000534406 LINC00612Q8N6U2 182 aa17.17■□□□□ 0.34
SIPA1-210ENST00000534406 IGHV3-16A0A0C4DH30 117 aa17.16■□□□□ 0.34
SIPA1-210ENST00000534406 HTN3P15516 51 aa17.16■□□□□ 0.34
SIPA1-210ENST00000534406 Q6ZTI0 123 aa17.16■□□□□ 0.34
SIPA1-210ENST00000534406 FAM210AQ96ND0 272 aa17.16■□□□□ 0.34
SIPA1-210ENST00000534406 MDFICQ9P1T7 246 aa17.16■□□□□ 0.34
SIPA1-210ENST00000534406 TRGV1A0A0A0MS02 117 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 GAGE12BA1L429 117 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 GNRH2O43555 120 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 GAGE7O76087 117 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 GAGE12FP0CL80 117 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 GAGE12GP0CL81 117 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 GAGE12IP0CL82 117 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 CRIP1P50238 77 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 ZNF674Q2M3X9 581 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 MLST8Q9BVC4 326 aa17.15■□□□□ 0.34
SIPA1-210ENST00000534406 EIF5A2Q9GZV4 153 aaKnown RBP17.15■□□□□ 0.34
SIPA1-210ENST00000534406 PLECQ15149 4684 aaKnown RBP17.15■□□□□ 0.34
SIPA1-210ENST00000534406 TMEM250H0YL14 139 aa17.14■□□□□ 0.33
SIPA1-210ENST00000534406 SPINK4O60575 86 aa17.14■□□□□ 0.33
SIPA1-210ENST00000534406 GNG4P50150 75 aa17.14■□□□□ 0.33
SIPA1-210ENST00000534406 SPXQ9BT56 116 aa17.14■□□□□ 0.33
SIPA1-210ENST00000534406 ORM1P02763 201 aa17.13■□□□□ 0.33
SIPA1-210ENST00000534406 ATP5G1P05496 136 aa17.13■□□□□ 0.33
SIPA1-210ENST00000534406 RAB19A4D1S5 217 aa17.12■□□□□ 0.33
SIPA1-210ENST00000534406 LGALS9BQ3B8N2 356 aa17.12■□□□□ 0.33
SIPA1-210ENST00000534406 SMIM12Q96EX1 92 aa17.12■□□□□ 0.33
SIPA1-210ENST00000534406 MRPL16Q9NX20 251 aaKnown RBP17.12■□□□□ 0.33
SIPA1-210ENST00000534406 TRGV2A0A075B6R0 118 aa17.11■□□□□ 0.33
SIPA1-210ENST00000534406 IGKV3D-20A0A0C4DH25 116 aa17.11■□□□□ 0.33
SIPA1-210ENST00000534406 B4DEV8 164 aa17.11■□□□□ 0.33
SIPA1-210ENST00000534406 IGLL5B9A064 214 aa17.11■□□□□ 0.33
SIPA1-210ENST00000534406 M0R036 132 aa17.11■□□□□ 0.33
SIPA1-210ENST00000534406 TRBV20OR9-2A0A075B6H5 130 aa17.1■□□□□ 0.33
SIPA1-210ENST00000534406 NDUFS6O75380 124 aaKnown RBP17.1■□□□□ 0.33
SIPA1-210ENST00000534406 LINC01559Q495D7 138 aa17.1■□□□□ 0.33
SIPA1-210ENST00000534406 PRR27Q6MZM9 219 aa17.1■□□□□ 0.33
SIPA1-210ENST00000534406 KRBOX1C9JBD0 128 aa17.09■□□□□ 0.33
SIPA1-210ENST00000534406 MGST1P10620 155 aaKnown RBP17.09■□□□□ 0.33
SIPA1-210ENST00000534406 ASIPP42127 132 aa17.09■□□□□ 0.33
SIPA1-210ENST00000534406 C18orf15Q96N68 181 aa17.09■□□□□ 0.33
SIPA1-210ENST00000534406 PARLQ9H300 379 aa17.09■□□□□ 0.33
SIPA1-210ENST00000534406 ALMS1Q8TCU4 4167 aa17.08■□□□□ 0.33
SIPA1-210ENST00000534406 IGHV4-4A0A075B6R2 117 aa17.08■□□□□ 0.32
SIPA1-210ENST00000534406 M0R2P5 195 aa17.08■□□□□ 0.32
SIPA1-210ENST00000534406 IGLV2-8P01709 118 aa17.08■□□□□ 0.32
SIPA1-210ENST00000534406 S100A4P26447 101 aaKnown RBP17.08■□□□□ 0.32
SIPA1-210ENST00000534406 CEBPGP53567 150 aa17.08■□□□□ 0.32
SIPA1-210ENST00000534406 RAB14P61106 215 aa17.08■□□□□ 0.32
SIPA1-210ENST00000534406 C9orf85Q96MD7 179 aa17.08■□□□□ 0.32
SIPA1-210ENST00000534406 MUC4Q99102 2169 aa17.07■□□□□ 0.32
SIPA1-210ENST00000534406 C9JCJ5 164 aa17.07■□□□□ 0.32
SIPA1-210ENST00000534406 F5H768 121 aa17.07■□□□□ 0.32
SIPA1-210ENST00000534406 TCTAP57738 103 aa17.07■□□□□ 0.32
SIPA1-210ENST00000534406 FAM210BQ96KR6 192 aa17.07■□□□□ 0.32
SIPA1-210ENST00000534406 DNAH1Q9P2D7 4330 aa17.07■□□□□ 0.32
SIPA1-210ENST00000534406 TMSB15BA0A087X1C1 80 aa17.06■□□□□ 0.32
SIPA1-210ENST00000534406 RNASE3P12724 160 aaKnown RBP17.06■□□□□ 0.32
SIPA1-210ENST00000534406 OR5I1Q13606 314 aa17.06■□□□□ 0.32
SIPA1-210ENST00000534406 RASL10AQ92737 203 aa17.06■□□□□ 0.32
SIPA1-210ENST00000534406 BIN3Q9NQY0 253 aa17.06■□□□□ 0.32
SIPA1-210ENST00000534406 KMT2CQ8NEZ4 4911 aaKnown RBP17.06■□□□□ 0.32
SIPA1-210ENST00000534406 PGPEP1LA6NFU8 196 aa17.05■□□□□ 0.32
SIPA1-210ENST00000534406 H3BVH4 76 aa17.04■□□□□ 0.32
SIPA1-210ENST00000534406 SRP19P09132 144 aaKnown RBP17.04■□□□□ 0.32
SIPA1-210ENST00000534406 DNLZQ5SXM8 178 aa17.04■□□□□ 0.32
SIPA1-210ENST00000534406 NDUFAF3Q9BU61 184 aa17.04■□□□□ 0.32
SIPA1-210ENST00000534406 IL36BQ9NZH7 164 aa17.04■□□□□ 0.32
SIPA1-210ENST00000534406 SACSQ9NZJ4 4579 aa17.04■□□□□ 0.32
SIPA1-210ENST00000534406 GRIFINA4D1Z8 144 aa17.03■□□□□ 0.32
SIPA1-210ENST00000534406 TMEM88Q6PEY1 159 aa17.03■□□□□ 0.32
SIPA1-210ENST00000534406 DAZAP1Q96EP5 407 aaKnown RBP17.03■□□□□ 0.32
SIPA1-210ENST00000534406 CXCL1P09341 107 aa17.02■□□□□ 0.32
SIPA1-210ENST00000534406 RPL19P84098 196 aaKnown RBP17.02■□□□□ 0.32
SIPA1-210ENST00000534406 PEA15Q15121 130 aa17.02■□□□□ 0.32
SIPA1-210ENST00000534406 ZNF876PQ49A33 203 aa17.02■□□□□ 0.32
SIPA1-210ENST00000534406 SMIM7Q9BQ49 75 aa17.02■□□□□ 0.32
SIPA1-210ENST00000534406 APLNQ9ULZ1 77 aa17.02■□□□□ 0.32
SIPA1-210ENST00000534406 IGHV3-53P01767 116 aa17.01■□□□□ 0.31
SIPA1-210ENST00000534406 HOXA5P20719 270 aa17.01■□□□□ 0.31
SIPA1-210ENST00000534406 IFITM2Q01629 132 aa17.01■□□□□ 0.31
SIPA1-210ENST00000534406 C19orf71A6NCJ1 209 aa17■□□□□ 0.31
SIPA1-210ENST00000534406 PTH2Q96A98 100 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms