RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ARL14EPLP0DKL9 152 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 GYPEP15421 78 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 GNG5P63218 68 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 Q6ZRN7 208 aaPredicted RBP6.08□□□□□ -1.44
COPB1-211ENST00000534234 HSD17B11Q8NBQ5 300 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 OR4C5Q8NGB2 326 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 PCNPQ8WW12 178 aaKnown RBP6.08□□□□□ -1.44
COPB1-211ENST00000534234 SGK494Q96LW2 274 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 BATF3Q9NR55 127 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 TNFRSF18Q9Y5U5 241 aa6.08□□□□□ -1.44
COPB1-211ENST00000534234 TRAV4A0A0B4J268 109 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 F6UZH7 168 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 STAG3L2P0CL84 134 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 STAG3L3P0CL85 134 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 CDC34P49427 236 aaPredicted RBP6.07□□□□□ -1.44
COPB1-211ENST00000534234 OR2G3Q8NGZ4 309 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 RAB24Q969Q5 203 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 KCNS1Q96KK3 526 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 MED28Q9H204 178 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 LY96Q9Y6Y9 160 aa6.07□□□□□ -1.44
COPB1-211ENST00000534234 C9JCJ5 164 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 EREGO14944 169 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 TCRAP04437 139 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 TYMSP04818 313 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 ATP6V0CP27449 155 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
COPB1-211ENST00000534234 SERF2P84101 59 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 C5orf17Q8NAS9 161 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 ASB13Q8WXK3 278 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 AQP10Q96PS8 301 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 TXNDC17Q9BRA2 123 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 NDFIP1Q9BT67 221 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 PSMG3Q9BT73 122 aaPredicted RBP6.06□□□□□ -1.44
COPB1-211ENST00000534234 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 SERTM2A0A1B0GWG4 89 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 K7EP13 123 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 K7EQM0 130 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 TAAR5O14804 337 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 MBP02144 154 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 EVI2AP22794 236 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 GCHFRP30047 84 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 Q5BKY6 102 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 NFE4Q86UQ8 179 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 WFDC10BQ8IUB3 73 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 SUN5Q8TC36 379 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 TNFSF18Q9UNG2 199 aa6.06□□□□□ -1.44
COPB1-211ENST00000534234 LOC100131303A0A0U1RQF7 123 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 PTTG1O95997 202 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 GCGP01275 180 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 ZNF80P51504 273 aaPredicted RBP6.05□□□□□ -1.44
COPB1-211ENST00000534234 ERVFC1-1P60608 527 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 ZNF876PQ49A33 203 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 Q8N1X5 172 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 ACTR3CQ9C0K3 210 aaPredicted RBP6.05□□□□□ -1.44
COPB1-211ENST00000534234 SCRT2Q9NQ03 307 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 TMEM167BQ9NRX6 74 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 MSRB1Q9NZV6 116 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 C11orf21Q9P2W6 132 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 EPDR1Q9UM22 224 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 PSG8Q9UQ74 426 aa6.05□□□□□ -1.44
COPB1-211ENST00000534234 FBLL1A6NHQ2 334 aaKnown RBP6.04□□□□□ -1.44
COPB1-211ENST00000534234 CXorf1O96002 111 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 IGLV2-11P01706 119 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 DNAH10OSP0CZ25 163 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 GATA1P15976 413 aaPredicted RBP6.04□□□□□ -1.44
COPB1-211ENST00000534234 FLI1Q01543 452 aaPredicted RBP6.04□□□□□ -1.44
COPB1-211ENST00000534234 SMUG1Q53HV7 270 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 SH2D6Q7Z4S9 175 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 PRNTQ86SH4 94 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 NHLRC2Q8NBF2 726 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 INO80EQ8NBZ0 244 aaPredicted RBP6.04□□□□□ -1.44
COPB1-211ENST00000534234 SH3BGRL3Q9H299 93 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 MUC4Q99102 2169 aa6.04□□□□□ -1.44
COPB1-211ENST00000534234 RYR1P21817 5038 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 A0A087WTM6 91 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 GGTLC3B5MD39 225 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 CRYGDP07320 174 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 PFN1P07737 140 aaKnown RBP6.03□□□□□ -1.44
COPB1-211ENST00000534234 GIPP09681 153 aaPredicted RBP6.03□□□□□ -1.44
COPB1-211ENST00000534234 FUSP35637 526 aaKnown RBP eCLIP6.03□□□□□ -1.441e-5■■■□□ 16.6
COPB1-211ENST00000534234 ZFP69Q49AA0 526 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 SAPCD1Q5SSQ6 148 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 CFAP126Q5VTH2 177 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 RPL7L1Q6DKI1 246 aaKnown RBP6.03□□□□□ -1.44
COPB1-211ENST00000534234 DPPA3Q6W0C5 159 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 CYB561D1Q8N8Q1 229 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 SLC25A29Q8N8R3 303 aa6.03□□□□□ -1.44
COPB1-211ENST00000534234 IGHV3-38A0A0C4DH36 116 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 TRBV6-4A0A1B0GX49 114 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 A0A1W2PRE2 83 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 RS1O15537 224 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 CIDEAO60543 219 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 PPT1P50897 306 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 TIRAPP58753 221 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 C10orf126Q8N4M7 172 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 TMEM75Q8N9X5 138 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 LINC00479Q96M42 142 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 C9orf85Q96MD7 179 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 PRADC1Q9BSG0 188 aa6.02□□□□□ -1.45
COPB1-211ENST00000534234 LRP1BQ9NZR2 4599 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms