RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 C12orf74Q32Q52 190 aa11.74□□□□□ -0.53
PACSIN3-210ENST00000533686 CENPWQ5EE01 88 aa11.74□□□□□ -0.53
PACSIN3-210ENST00000533686 FAM162BQ5T6X4 162 aa11.74□□□□□ -0.53
PACSIN3-210ENST00000533686 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
PACSIN3-210ENST00000533686 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
PACSIN3-210ENST00000533686 RAB19A4D1S5 217 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 SH2D1AO60880 128 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 GNG4P50150 75 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 TCL1AP56279 114 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 CLLU1Q5K131 121 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 SMDT1Q9H4I9 107 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 GSN-AS1Q9NRJ2 163 aa11.73□□□□□ -0.53
PACSIN3-210ENST00000533686 C9JCJ5 164 aa11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 GNRH2O43555 120 aa11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 TYMSP04818 313 aa11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 SRP19P09132 144 aaKnown RBP11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 ZNF415Q09FC8 603 aa11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 PARLQ9H300 379 aa11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 MDFICQ9P1T7 246 aa11.72□□□□□ -0.53
PACSIN3-210ENST00000533686 TRBV20OR9-2A0A075B6H5 130 aa11.71□□□□□ -0.53
PACSIN3-210ENST00000533686 IGKV3D-20A0A0C4DH25 116 aa11.71□□□□□ -0.53
PACSIN3-210ENST00000533686 IGHV3-16A0A0C4DH30 117 aa11.71□□□□□ -0.53
PACSIN3-210ENST00000533686 DAD1P61803 113 aa11.71□□□□□ -0.53
PACSIN3-210ENST00000533686 PEA15Q15121 130 aa11.71□□□□□ -0.53
PACSIN3-210ENST00000533686 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.53
PACSIN3-210ENST00000533686 SPXQ9BT56 116 aa11.71□□□□□ -0.53
PACSIN3-210ENST00000533686 SPINK4O60575 86 aa11.7□□□□□ -0.54
PACSIN3-210ENST00000533686 ORM1P02763 201 aa11.7□□□□□ -0.54
PACSIN3-210ENST00000533686 LGALS9BQ3B8N2 356 aa11.7□□□□□ -0.54
PACSIN3-210ENST00000533686 LINC01559Q495D7 138 aa11.7□□□□□ -0.54
PACSIN3-210ENST00000533686 Q6ZTC4 211 aa11.7□□□□□ -0.54
PACSIN3-210ENST00000533686 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
PACSIN3-210ENST00000533686 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
PACSIN3-210ENST00000533686 B4DEV8 164 aa11.69□□□□□ -0.54
PACSIN3-210ENST00000533686 KRBOX1C9JBD0 128 aa11.69□□□□□ -0.54
PACSIN3-210ENST00000533686 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 DEFB130BP0DP73 79 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 DEFB130AP0DP74 79 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 MGST1P10620 155 aaKnown RBP11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 SRSF3P84103 164 aaKnown RBP11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 DNLZQ5SXM8 178 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 ZFAND6Q6FIF0 208 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
PACSIN3-210ENST00000533686 DYNC2H1Q8NCM8 4307 aaKnown RBP11.67□□□□□ -0.54
PACSIN3-210ENST00000533686 C9JQL5 133 aa11.67□□□□□ -0.54
PACSIN3-210ENST00000533686 CEBPGP53567 150 aa11.67□□□□□ -0.54
PACSIN3-210ENST00000533686 PRR27Q6MZM9 219 aa11.67□□□□□ -0.54
PACSIN3-210ENST00000533686 Q6ZTI0 123 aa11.67□□□□□ -0.54
PACSIN3-210ENST00000533686 OCC1Q8TAD7 63 aa11.67□□□□□ -0.54
PACSIN3-210ENST00000533686 LY96Q9Y6Y9 160 aa11.67□□□□□ -0.54
PACSIN3-210ENST00000533686 STARD9Q9P2P6 4700 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 TRGV1A0A0A0MS02 117 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 GAGE12BA1L429 117 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 C19orf71A6NCJ1 209 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 PGPEP1LA6NFU8 196 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 M0R036 132 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 GAGE7O76087 117 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 CXCL1P09341 107 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 GAGE12FP0CL80 117 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 GAGE12GP0CL81 117 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 GAGE12IP0CL82 117 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 ASIPP42127 132 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 FAM74A3Q4VXF1 159 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 ZNF575Q86XF7 245 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 RASL10AQ92737 203 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 DAZAP1Q96EP5 407 aaKnown RBP11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 SMIM7Q9BQ49 75 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 CSMD3Q7Z407 3707 aa11.66□□□□□ -0.54
PACSIN3-210ENST00000533686 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.54
PACSIN3-210ENST00000533686 ZNF727A8MUV8 499 aa11.65□□□□□ -0.54
PACSIN3-210ENST00000533686 M0R2P5 195 aa11.65□□□□□ -0.54
PACSIN3-210ENST00000533686 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
PACSIN3-210ENST00000533686 OR5I1Q13606 314 aa11.65□□□□□ -0.54
PACSIN3-210ENST00000533686 PTH2Q96A98 100 aa11.65□□□□□ -0.54
PACSIN3-210ENST00000533686 KLK5Q9Y337 293 aaPredicted RBP11.65□□□□□ -0.54
PACSIN3-210ENST00000533686 K7EN84 100 aa11.64□□□□□ -0.55
PACSIN3-210ENST00000533686 ATP5G1P05496 136 aa11.64□□□□□ -0.55
PACSIN3-210ENST00000533686 NDUFAF3Q9BU61 184 aa11.64□□□□□ -0.55
PACSIN3-210ENST00000533686 MRPL16Q9NX20 251 aaKnown RBP11.64□□□□□ -0.55
PACSIN3-210ENST00000533686 IL36BQ9NZH7 164 aa11.64□□□□□ -0.55
PACSIN3-210ENST00000533686 TRGV2A0A075B6R0 118 aa11.63□□□□□ -0.55
PACSIN3-210ENST00000533686 TMSB15BA0A087X1C1 80 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 GRIFINA4D1Z8 144 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 P01737 135 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 ARMS2P0C7Q2 107 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 MED14OSP0DP75 135 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 RPS20P60866 119 aaKnown RBP11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 RPL19P84098 196 aaKnown RBP11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 PIK3CD-AS1Q5SR53 167 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 FAM210BQ96KR6 192 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 SCRT2Q9NQ03 307 aa11.62□□□□□ -0.55
PACSIN3-210ENST00000533686 HTN3P15516 51 aa11.61□□□□□ -0.55
PACSIN3-210ENST00000533686 TMEM241Q24JQ0 296 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms