RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MEF2BQ02080 365 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-214ENST00000533209 ZNF415Q09FC8 603 aa8.48□□□□□ -1.05
SSBP3-214ENST00000533209 Q6ZTI0 123 aa8.48□□□□□ -1.05
SSBP3-214ENST00000533209 MDFICQ9P1T7 246 aa8.48□□□□□ -1.05
SSBP3-214ENST00000533209 TRGV11A0A075B6L2 103 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 IGHV3-16A0A0C4DH30 117 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 GAGE12BA1L429 117 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 IGLL5B9A064 214 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 SPINK4O60575 86 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 GAGE7O76087 117 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 TYMSP04818 313 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 GAGE12FP0CL80 117 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 GAGE12GP0CL81 117 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 GAGE12IP0CL82 117 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 HTN3P15516 51 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 TEX261Q6UWH6 196 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 KCNS1Q96KK3 526 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 DERL1Q9BUN8 251 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 VAX2Q9UIW0 290 aa8.47□□□□□ -1.05
SSBP3-214ENST00000533209 IGHV4-4A0A075B6R2 117 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 PDE6DO43924 150 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 ATP5G1P05496 136 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 TAGLN2P37802 199 aaKnown RBP8.46□□□□□ -1.06
SSBP3-214ENST00000533209 RPL35P42766 123 aaKnown RBP8.46□□□□□ -1.06
SSBP3-214ENST00000533209 BAGE2Q86Y30 109 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 NHLRC2Q8NBF2 726 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 SPXQ9BT56 116 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 MLST8Q9BVC4 326 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 SDF2L1Q9HCN8 221 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 APLNQ9ULZ1 77 aa8.46□□□□□ -1.06
SSBP3-214ENST00000533209 TRGV1A0A0A0MS02 117 aa8.45□□□□□ -1.06
SSBP3-214ENST00000533209 LCE6AA0A183 80 aa8.45□□□□□ -1.06
SSBP3-214ENST00000533209 SH2D1AO60880 128 aa8.45□□□□□ -1.06
SSBP3-214ENST00000533209 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
SSBP3-214ENST00000533209 LGALS9BQ3B8N2 356 aa8.45□□□□□ -1.06
SSBP3-214ENST00000533209 C18orf15Q96N68 181 aa8.45□□□□□ -1.06
SSBP3-214ENST00000533209 MRPL16Q9NX20 251 aaKnown RBP8.45□□□□□ -1.06
SSBP3-214ENST00000533209 DNAH1Q9P2D7 4330 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 RYR3Q15413 4870 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 IGKV3D-20A0A0C4DH25 116 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 RBFOX3A6NFN3 312 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 TCTAP57738 103 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 FAM162BQ5T6X4 162 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 MED9Q9NWA0 146 aa8.44□□□□□ -1.06
SSBP3-214ENST00000533209 RYR2Q92736 4967 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 TRBV20OR9-2A0A075B6H5 130 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 TRGV2A0A075B6R0 118 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 RAB19A4D1S5 217 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 KRBOX1C9JBD0 128 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 F5H768 121 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 IGLV2-8P01709 118 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 CENPWQ5EE01 88 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 TMEM88Q6PEY1 159 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 ZNF575Q86XF7 245 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 PCNPQ8WW12 178 aaKnown RBP8.43□□□□□ -1.06
SSBP3-214ENST00000533209 RASL10AQ92737 203 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 NDUFAF3Q9BU61 184 aa8.43□□□□□ -1.06
SSBP3-214ENST00000533209 ALMS1Q8TCU4 4167 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 B4DEV8 164 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 M0R036 132 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 M0R2P5 195 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 ORM1P02763 201 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
SSBP3-214ENST00000533209 HOXA5P20719 270 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 LINC01559Q495D7 138 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 TOR2AQ5JU69 321 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 LINC00476Q8WZB0 136 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 FAM210AQ96ND0 272 aa8.42□□□□□ -1.06
SSBP3-214ENST00000533209 TMEM250H0YL14 139 aa8.41□□□□□ -1.06
SSBP3-214ENST00000533209 DNLZQ5SXM8 178 aa8.41□□□□□ -1.06
SSBP3-214ENST00000533209 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 PGPEP1LA6NFU8 196 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 IGHV3-53P01767 116 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 ASIPP42127 132 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 GNG4P50150 75 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 OR5I1Q13606 314 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 LGALS9CQ6DKI2 356 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 PRR27Q6MZM9 219 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 POM121L12Q8N7R1 296 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 PTH2Q96A98 100 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 LYSTQ99698 3801 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.06
SSBP3-214ENST00000533209 VPS13DQ5THJ4 4388 aa8.4□□□□□ -1.06
SSBP3-214ENST00000533209 TMSB15BA0A087X1C1 80 aa8.39□□□□□ -1.07
SSBP3-214ENST00000533209 NDUFS6O75380 124 aaKnown RBP8.39□□□□□ -1.07
SSBP3-214ENST00000533209 LY6G6CO95867 125 aa8.39□□□□□ -1.07
SSBP3-214ENST00000533209 S100A4P26447 101 aaKnown RBP8.39□□□□□ -1.07
SSBP3-214ENST00000533209 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
SSBP3-214ENST00000533209 PARLQ9H300 379 aa8.39□□□□□ -1.07
SSBP3-214ENST00000533209 IL36BQ9NZH7 164 aa8.39□□□□□ -1.07
SSBP3-214ENST00000533209 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 C9JCJ5 164 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 H3BVH4 76 aa8.38□□□□□ -1.07
SSBP3-214ENST00000533209 SFTA3P0C7M3 94 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms