RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 BORCS7-ASMTA0A0B4J1R7 106 aa16.1■□□□□ 0.17
SMPD1-209ENST00000533196 TRAV4A0A0B4J268 109 aa16.1■□□□□ 0.17
SMPD1-209ENST00000533196 IGHV3-16A0A0C4DH30 117 aa16.1■□□□□ 0.17
SMPD1-209ENST00000533196 FBLL1A6NHQ2 334 aaKnown RBP16.1■□□□□ 0.17
SMPD1-209ENST00000533196 ORM1P02763 201 aa16.1■□□□□ 0.17
SMPD1-209ENST00000533196 NEGR1Q7Z3B1 354 aa16.1■□□□□ 0.17
SMPD1-209ENST00000533196 ZNF479Q96JC4 524 aa16.1■□□□□ 0.17
SMPD1-209ENST00000533196 RNF222A6NCQ9 220 aa16.09■□□□□ 0.17
SMPD1-209ENST00000533196 F6UZH7 168 aa16.09■□□□□ 0.17
SMPD1-209ENST00000533196 TYMSP04818 313 aa16.09■□□□□ 0.17
SMPD1-209ENST00000533196 LYPD5Q6UWN5 251 aa16.09■□□□□ 0.17
SMPD1-209ENST00000533196 PCLOQ9Y6V0 5065 aa16.08■□□□□ 0.16
SMPD1-209ENST00000533196 C16orf90A8MZG2 172 aa16.08■□□□□ 0.16
SMPD1-209ENST00000533196 GNRH2O43555 120 aa16.08■□□□□ 0.16
SMPD1-209ENST00000533196 NXPH4O95158 308 aa16.08■□□□□ 0.16
SMPD1-209ENST00000533196 SFTA3P0C7M3 94 aa16.08■□□□□ 0.16
SMPD1-209ENST00000533196 PCNPQ8WW12 178 aaKnown RBP16.08■□□□□ 0.16
SMPD1-209ENST00000533196 KRTAP17-1Q9BYP8 105 aa16.08■□□□□ 0.16
SMPD1-209ENST00000533196 SH3BGRL3Q9H299 93 aa16.08■□□□□ 0.16
SMPD1-209ENST00000533196 FXYD6-FXYD2A0A087WZ82 144 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 A0A1W2PRE2 83 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 SRIP30626 198 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 SUMO1P63165 101 aaKnown RBP16.07■□□□□ 0.16
SMPD1-209ENST00000533196 RPL7L1Q6DKI1 246 aaKnown RBP16.07■□□□□ 0.16
SMPD1-209ENST00000533196 OR4C5Q8NGB2 326 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 OR2T35Q8NGX2 323 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 EPDR1Q9UM22 224 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 PSG8Q9UQ74 426 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 LRP1BQ9NZR2 4599 aa16.07■□□□□ 0.16
SMPD1-209ENST00000533196 K7EQD1 137 aa16.06■□□□□ 0.16
SMPD1-209ENST00000533196 TAAR5O14804 337 aa16.06■□□□□ 0.16
SMPD1-209ENST00000533196 CYB561D1Q8N8Q1 229 aa16.06■□□□□ 0.16
SMPD1-209ENST00000533196 FLI1Q01543 452 aaPredicted RBP16.05■□□□□ 0.16
SMPD1-209ENST00000533196 ZFP69Q49AA0 526 aa16.05■□□□□ 0.16
SMPD1-209ENST00000533196 TMEM75Q8N9X5 138 aa16.05■□□□□ 0.16
SMPD1-209ENST00000533196 SGK494Q96LW2 274 aa16.05■□□□□ 0.16
SMPD1-209ENST00000533196 TXNDC17Q9BRA2 123 aa16.05■□□□□ 0.16
SMPD1-209ENST00000533196 CTXND1A0A1B0GTU2 59 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 GGTLC3B5MD39 225 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 C9JCJ5 164 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 K7EP13 123 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 CIDEAO60543 219 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 PFN1P07737 140 aaKnown RBP16.04■□□□□ 0.16
SMPD1-209ENST00000533196 GYPEP15421 78 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 LINC00315P59091 139 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 RGS21Q2M5E4 152 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 SMUG1Q53HV7 270 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 SAPCD1Q5SSQ6 148 aa16.04■□□□□ 0.16
SMPD1-209ENST00000533196 GCGP01275 180 aa16.03■□□□□ 0.16
SMPD1-209ENST00000533196 IGLV2-11P01706 119 aa16.03■□□□□ 0.16
SMPD1-209ENST00000533196 SH2D6Q7Z4S9 175 aa16.03■□□□□ 0.16
SMPD1-209ENST00000533196 TRAV9-2A0A087WT02 112 aa16.02■□□□□ 0.16
SMPD1-209ENST00000533196 CDK2AP2O75956 126 aa16.02■□□□□ 0.16
SMPD1-209ENST00000533196 ZNF80P51504 273 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-209ENST00000533196 NKX6-2Q9C056 277 aaPredicted RBP16.02■□□□□ 0.16
SMPD1-209ENST00000533196 SPATA12Q7Z6I5 190 aa16.01■□□□□ 0.15
SMPD1-209ENST00000533196 PRNTQ86SH4 94 aa16.01■□□□□ 0.15
SMPD1-209ENST00000533196 PTH2Q96A98 100 aa16.01■□□□□ 0.15
SMPD1-209ENST00000533196 AKR1C8PQ5T2L2 129 aa16■□□□□ 0.15
SMPD1-209ENST00000533196 Q6ZRN7 208 aaPredicted RBP16■□□□□ 0.15
SMPD1-209ENST00000533196 NFE4Q86UQ8 179 aa16■□□□□ 0.15
SMPD1-209ENST00000533196 C11orf21Q9P2W6 132 aa16■□□□□ 0.15
SMPD1-209ENST00000533196 LY96Q9Y6Y9 160 aa16■□□□□ 0.15
SMPD1-209ENST00000533196 G3V3Q6 166 aa15.99■□□□□ 0.15
SMPD1-209ENST00000533196 GATA1P15976 413 aaPredicted RBP15.99■□□□□ 0.15
SMPD1-209ENST00000533196 PPT1P50897 306 aa15.99■□□□□ 0.15
SMPD1-209ENST00000533196 TIRAPP58753 221 aa15.99■□□□□ 0.15
SMPD1-209ENST00000533196 ZNF726P1Q15940 193 aa15.99■□□□□ 0.15
SMPD1-209ENST00000533196 ZNF876PQ49A33 203 aa15.99■□□□□ 0.15
SMPD1-209ENST00000533196 C9orf85Q96MD7 179 aa15.99■□□□□ 0.15
SMPD1-209ENST00000533196 HSPG2P98160 4391 aa15.99■□□□□ 0.15
SMPD1-209ENST00000533196 RS1O15537 224 aa15.97■□□□□ 0.15
SMPD1-209ENST00000533196 HIST1H2BAQ96A08 127 aa15.97■□□□□ 0.15
SMPD1-209ENST00000533196 BOLA1Q9Y3E2 137 aa15.97■□□□□ 0.15
SMPD1-209ENST00000533196 DNAH5Q8TE73 4624 aa15.96■□□□□ 0.15
SMPD1-209ENST00000533196 ARPC5O15511 151 aa15.96■□□□□ 0.15
SMPD1-209ENST00000533196 IFNA7P01567 189 aa15.96■□□□□ 0.15
SMPD1-209ENST00000533196 EVI2AP22794 236 aa15.96■□□□□ 0.15
SMPD1-209ENST00000533196 DNAH10OSP0CZ25 163 aa15.95■□□□□ 0.14
SMPD1-209ENST00000533196 CFAP126Q5VTH2 177 aa15.95■□□□□ 0.14
SMPD1-209ENST00000533196 CYTL1Q9NRR1 136 aa15.95■□□□□ 0.14
SMPD1-209ENST00000533196 ARL2-SNX15V9GYD0 113 aa15.95■□□□□ 0.14
SMPD1-209ENST00000533196 TRBV6-4A0A1B0GX49 114 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 FAM74A7A6NL05 159 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 FABP5P3A8MUU1 101 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 PEX7O00628 323 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 RHOHQ15669 191 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 PIK3CD-AS1Q5SR53 167 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 WFDC10BQ8IUB3 73 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 C10orf126Q8N4M7 172 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 PRADC1Q9BSG0 188 aa15.94■□□□□ 0.14
SMPD1-209ENST00000533196 EREGO14944 169 aa15.93■□□□□ 0.14
SMPD1-209ENST00000533196 RNASE3P12724 160 aaKnown RBP15.93■□□□□ 0.14
SMPD1-209ENST00000533196 KRTAP10-2P60368 255 aa15.93■□□□□ 0.14
SMPD1-209ENST00000533196 UBE2G2P60604 165 aa15.93■□□□□ 0.14
SMPD1-209ENST00000533196 SLC25A29Q8N8R3 303 aa15.93■□□□□ 0.14
SMPD1-209ENST00000533196 NHLRC2Q8NBF2 726 aa15.93■□□□□ 0.14
SMPD1-209ENST00000533196 LINC00479Q96M42 142 aa15.93■□□□□ 0.14
SMPD1-209ENST00000533196 TCEAL7Q9BRU2 100 aa15.93■□□□□ 0.14
SMPD1-209ENST00000533196 APOBP04114 4563 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms