RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MRPL18Q9H0U6 180 aaKnown RBP13.83□□□□□ -0.2
SMPD1-208ENST00000533123 SNURFLB1AK76 121 aa13.83□□□□□ -0.2
SMPD1-208ENST00000533123 SERF1AO75920 110 aa13.83□□□□□ -0.2
SMPD1-208ENST00000533123 COX8CQ7Z4L0 72 aa13.83□□□□□ -0.2
SMPD1-208ENST00000533123 CRISP2P16562 243 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 FAM162BQ5T6X4 162 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 OR4B1Q8NGF8 309 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 PGLYRP4Q96LB8 373 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 IGLV1-51P01701 117 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 TMEM78Q5T7P6 136 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 WFDC9Q8NEX5 89 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 MIEN1Q9BRT3 115 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 NDFIP1Q9BT67 221 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 CLEC5AQ9NY25 188 aa13.82□□□□□ -0.2
SMPD1-208ENST00000533123 TMEM136Q6ZRR5 245 aa13.81□□□□□ -0.2
SMPD1-208ENST00000533123 TMSB15BA0A087X1C1 80 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 F6UB75 175 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 ZNF138P52744 262 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 C9orf47Q6ZRZ4 202 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 TMEM208Q9BTX3 173 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 F2Z2F3 143 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 PRR31Q5SQ13 230 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 GDF5OSQ5U4N7 250 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 GNB1LQ9BYB4 327 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 GFRA4Q9GZZ7 299 aa13.8□□□□□ -0.2
SMPD1-208ENST00000533123 K7EQG2 157 aa13.79□□□□□ -0.2
SMPD1-208ENST00000533123 Q0VG73 95 aa13.79□□□□□ -0.2
SMPD1-208ENST00000533123 DLEU1O43261 78 aa13.79□□□□□ -0.2
SMPD1-208ENST00000533123 PAM16Q9Y3D7 125 aa13.79□□□□□ -0.2
SMPD1-208ENST00000533123 TRAV25A0A0B4J276 109 aa13.78□□□□□ -0.2
SMPD1-208ENST00000533123 IGLL1P15814 213 aa13.78□□□□□ -0.2
SMPD1-208ENST00000533123 C9orf66Q5T8R8 295 aa13.78□□□□□ -0.2
SMPD1-208ENST00000533123 WDR73Q6P4I2 378 aa13.78□□□□□ -0.2
SMPD1-208ENST00000533123 BAGE3Q86Y29 109 aa13.78□□□□□ -0.2
SMPD1-208ENST00000533123 ZNF688P0C7X2 276 aa13.78□□□□□ -0.2
SMPD1-208ENST00000533123 CAMPP49913 170 aa13.78□□□□□ -0.2
SMPD1-208ENST00000533123 A0A1B0GXF2 115 aa13.77□□□□□ -0.21
SMPD1-208ENST00000533123 TMEM189A5PLL7 270 aa13.77□□□□□ -0.21
SMPD1-208ENST00000533123 HIST1H1AQ02539 215 aaPredicted RBP13.77□□□□□ -0.21
SMPD1-208ENST00000533123 OR10J6PQ8NGY7 276 aa13.77□□□□□ -0.21
SMPD1-208ENST00000533123 SPAG8Q99932 426 aaPredicted RBP13.77□□□□□ -0.21
SMPD1-208ENST00000533123 VAMP8Q9BV40 100 aa13.77□□□□□ -0.21
SMPD1-208ENST00000533123 CMYA5Q8N3K9 4069 aa13.77□□□□□ -0.21
SMPD1-208ENST00000533123 FAM231BA6NCW3 169 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 ID1P41134 155 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 INSL3P51460 131 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 GAGE1Q13065 139 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 KIAA1644Q3SXP7 199 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 Q6ZQT7 251 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 TPPP3Q9BW30 176 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 ZNF256Q9Y2P7 627 aaPredicted RBP13.76□□□□□ -0.21
SMPD1-208ENST00000533123 PRR9Q5T870 116 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 SAMD13Q5VXD3 122 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 MCRIP2Q9BUT9 160 aaKnown RBP13.76□□□□□ -0.21
SMPD1-208ENST00000533123 SSBP4Q9BWG4 385 aaPredicted RBP13.76□□□□□ -0.21
SMPD1-208ENST00000533123 SAMD10Q9BYL1 202 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 GOLT1BQ9Y3E0 138 aa13.76□□□□□ -0.21
SMPD1-208ENST00000533123 MT-ND6P03923 174 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 NPSP0C0P6 89 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 SNRPD3P62318 126 aaKnown RBP13.75□□□□□ -0.21
SMPD1-208ENST00000533123 SLAQ13239 276 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 PSMG4Q5JS54 123 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 OR8A1Q8NGG7 326 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 J3KRW8 73 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
SMPD1-208ENST00000533123 RASL11AQ6T310 242 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 ATP5L2Q7Z4Y8 100 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 ZNF575Q86XF7 245 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 Q8N976 141 aa13.75□□□□□ -0.21
SMPD1-208ENST00000533123 OR4C46A6NHA9 309 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 FABP5P3A8MUU1 101 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 HLA-DQA1P01909 254 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 ORM1P02763 201 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 GPX1P07203 203 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 HBBP68871 147 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 COX19Q49B96 90 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 OR2K2Q8NGT1 345 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 PPP1R14DQ9NXH3 145 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 TRAV2A0A0B4J234 112 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 ARMS2P0C7Q2 107 aa13.74□□□□□ -0.21
SMPD1-208ENST00000533123 APCSP02743 223 aa13.73□□□□□ -0.21
SMPD1-208ENST00000533123 LINC00477Q96M19 166 aa13.73□□□□□ -0.21
SMPD1-208ENST00000533123 C11orf21Q9P2W6 132 aa13.73□□□□□ -0.21
SMPD1-208ENST00000533123 DEFB131AP59861 70 aa13.72□□□□□ -0.21
SMPD1-208ENST00000533123 OXLD1Q5BKU9 147 aa13.72□□□□□ -0.21
SMPD1-208ENST00000533123 ZFAND2AQ8N6M9 145 aa13.72□□□□□ -0.21
SMPD1-208ENST00000533123 AGRNO00468 2067 aa13.71□□□□□ -0.21
SMPD1-208ENST00000533123 MUC21A0A0G2JKD1 596 aa13.71□□□□□ -0.21
SMPD1-208ENST00000533123 MUC21A0A140T8X8 626 aa13.71□□□□□ -0.21
SMPD1-208ENST00000533123 KRTDAPP60985 99 aa13.71□□□□□ -0.21
SMPD1-208ENST00000533123 MUC21Q5SSG8 566 aa13.71□□□□□ -0.21
SMPD1-208ENST00000533123 A0A1B0GUT8 65 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 CTRLP40313 264 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 KIR3DS1Q14943 382 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 BATFQ16520 125 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 LINC01559Q495D7 138 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 OR10J3Q5JRS4 329 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 LYZL1Q6UWQ5 148 aa13.71□□□□□ -0.22
SMPD1-208ENST00000533123 MAP6D1Q9H9H5 199 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms