RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 IGKV2D-24A0A075B6R9 120 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 MORN5Q5VZ52 161 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
COLCA1-203ENST00000532918 A0A1W2PPM0 123 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 A4D1N5 150 aa8.44□□□□□ -1.06
COLCA1-203ENST00000532918 RBAKDNA6NC62 111 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 PCNX2A6NKB5 2137 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 ZNF407Q9C0G0 2248 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 IGHV7-81A0A0B4J1V7 117 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 IGLC2P0DOY2 106 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 IGLC3P0DOY3 106 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 SEM1Q6ZVN7 128 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 STPG4Q8N801 248 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 ZNF491Q8N8L2 437 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 VOPP1Q96AW1 172 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 ZNF524Q96C55 264 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 ROS1P08922 2347 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 SDHAF1A6NFY7 115 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 C5orf56Q8N8D9 126 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 TP53TG1Q9Y2A0 90 aa8.43□□□□□ -1.06
COLCA1-203ENST00000532918 IGHG4P01861 327 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 PKDREJQ9NTG1 2253 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 BLCAPP62952 87 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 Q8N8P6 123 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 LRRK1Q38SD2 2015 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 FGF6P10767 208 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 IGLC7A0M8Q6 106 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 Q0VG73 95 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 KRTAP27-1Q3LI81 207 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 NDUFA11Q86Y39 141 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
COLCA1-203ENST00000532918 IGKV1OR2-108A0A075B7D4 117 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 SHISA2Q6UWI4 295 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 AJUBAQ96IF1 538 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 U3KQE9 123 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 A0A0J9YY99 117 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 K7EMT4 169 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 EGR2P11161 476 aaPredicted RBP8.41□□□□□ -1.06
COLCA1-203ENST00000532918 HLA-DRB4P13762 266 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 KLF5Q13887 457 aaPredicted RBP8.41□□□□□ -1.06
COLCA1-203ENST00000532918 BRK1Q8WUW1 75 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 RETNQ9HD89 108 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 HLA-DRB4X5D2U9 266 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 NBASA2RRP1 2371 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 C20orf173Q96LM9 149 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 DOCK7Q96N67 2140 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 DNAJC9-AS1A6NH13 148 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 DOPEY2Q9Y3R5 2298 aa8.41□□□□□ -1.06
COLCA1-203ENST00000532918 TECTAO75443 2155 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 UBE2BP63146 152 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 IGKV1-39P01597 117 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 IGKV1D-39P04432 117 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 HERVK_113P63121 156 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 IGFBPL1Q8WX77 278 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 DSCR8Q96T75 97 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 TNFRSF13BO14836 293 aaPredicted RBP8.4□□□□□ -1.06
COLCA1-203ENST00000532918 SPATA25Q9BR10 227 aa8.4□□□□□ -1.06
COLCA1-203ENST00000532918 ZFHX2Q9C0A1 2572 aaPredicted RBP8.4□□□□□ -1.07
COLCA1-203ENST00000532918 MYLKQ15746 1914 aa8.4□□□□□ -1.07
COLCA1-203ENST00000532918 A0A096LPF7 62 aa8.4□□□□□ -1.07
COLCA1-203ENST00000532918 PRSS29PA6NIE9 313 aa8.4□□□□□ -1.07
COLCA1-203ENST00000532918 H3BMG7 143 aa8.4□□□□□ -1.07
COLCA1-203ENST00000532918 HERV-K104P63124 156 aa8.4□□□□□ -1.07
COLCA1-203ENST00000532918 PHF3Q92576 2039 aaKnown RBP8.4□□□□□ -1.07
COLCA1-203ENST00000532918 YLPM1P49750 1951 aaKnown RBP8.39□□□□□ -1.07
COLCA1-203ENST00000532918 Q6ZWC4 215 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 IGHG2P01859 326 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 BVES-AS1Q5T3Y7 98 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 Q8N9W7 124 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 LINC00479Q96M42 142 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 SIRPDQ9H106 197 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 NOTCH4Q99466 2003 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 IGHV4OR15-8A0A075B7B6 117 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 A0A087WW49 117 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
COLCA1-203ENST00000532918 ATOX1O00244 68 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 ACYP1P07311 99 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 SPTAN1Q13813 2472 aaKnown RBP8.39□□□□□ -1.07
COLCA1-203ENST00000532918 FAM231DQ6ZW35 169 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 GPHB5Q86YW7 130 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 IGHV3-38A0A0C4DH36 116 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 ZFP36P26651 326 aaKnown RBP8.39□□□□□ -1.07
COLCA1-203ENST00000532918 APRG1Q8IVJ8 170 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 NTN5Q8WTR8 489 aaPredicted RBP8.39□□□□□ -1.07
COLCA1-203ENST00000532918 BAALCQ8WXS3 180 aa8.39□□□□□ -1.07
COLCA1-203ENST00000532918 TMEM213A2RRL7 107 aa8.38□□□□□ -1.07
COLCA1-203ENST00000532918 HELZP42694 1942 aaKnown RBP8.38□□□□□ -1.07
COLCA1-203ENST00000532918 IGLV11-55A0A075B6I3 123 aa8.38□□□□□ -1.07
COLCA1-203ENST00000532918 COX8AP10176 69 aa8.38□□□□□ -1.07
COLCA1-203ENST00000532918 TAL2Q16559 108 aa8.38□□□□□ -1.07
COLCA1-203ENST00000532918 C20orf78Q9BR46 151 aa8.38□□□□□ -1.07
COLCA1-203ENST00000532918 C2orf70A6NJV1 201 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms