RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 SMUG1Q53HV7 270 aa13.2□□□□□ -0.3
PUF60-218ENST00000531995 ZNF767PQ75MW2 155 aa13.2□□□□□ -0.3
PUF60-218ENST00000531995 C16orf74Q96GX8 76 aa13.2□□□□□ -0.3
PUF60-218ENST00000531995 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
PUF60-218ENST00000531995 ZFP30Q9Y2G7 519 aa13.2□□□□□ -0.3
PUF60-218ENST00000531995 IGHV4-4A0A075B6R2 117 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 RBFOX3A6NFN3 312 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 S100A9P06702 114 aaKnown RBP13.19□□□□□ -0.3
PUF60-218ENST00000531995 SPART-AS1P0CW21 52 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 TCTAP57738 103 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 IFITM2Q01629 132 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 TDRG1Q3Y452 100 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 ZC2HC1AQ96GY0 325 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 MLST8Q9BVC4 326 aa13.19□□□□□ -0.3
PUF60-218ENST00000531995 DNAH17Q9UFH2 4485 aa13.18□□□□□ -0.3
PUF60-218ENST00000531995 CBY3A6NI87 242 aa13.18□□□□□ -0.3
PUF60-218ENST00000531995 RGS13O14921 159 aa13.18□□□□□ -0.3
PUF60-218ENST00000531995 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
PUF60-218ENST00000531995 RPL35P42766 123 aaKnown RBP13.18□□□□□ -0.3
PUF60-218ENST00000531995 UBE2G1P62253 170 aa13.18□□□□□ -0.3
PUF60-218ENST00000531995 ZNF506Q5JVG8 444 aa13.18□□□□□ -0.3
PUF60-218ENST00000531995 ZNF575Q86XF7 245 aa13.18□□□□□ -0.3
PUF60-218ENST00000531995 TRAV10A0A0B4J240 114 aa13.17□□□□□ -0.3
PUF60-218ENST00000531995 GNRH2O43555 120 aa13.17□□□□□ -0.3
PUF60-218ENST00000531995 PDE6DO43924 150 aa13.17□□□□□ -0.3
PUF60-218ENST00000531995 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
PUF60-218ENST00000531995 TMEM183AQ8IXX5 376 aa13.17□□□□□ -0.3
PUF60-218ENST00000531995 NOP10Q9NPE3 64 aaKnown RBP13.17□□□□□ -0.3
PUF60-218ENST00000531995 GSN-AS1Q9NRJ2 163 aa13.17□□□□□ -0.3
PUF60-218ENST00000531995 MDFICQ9P1T7 246 aa13.17□□□□□ -0.3
PUF60-218ENST00000531995 TIMM8BQ9Y5J9 83 aaPredicted RBP13.17□□□□□ -0.3
PUF60-218ENST00000531995 RAB19A4D1S5 217 aa13.16□□□□□ -0.3
PUF60-218ENST00000531995 LYRM9A8MSI8 78 aa13.16□□□□□ -0.3
PUF60-218ENST00000531995 IGLV2-8P01709 118 aa13.16□□□□□ -0.3
PUF60-218ENST00000531995 DAZ2Q13117 558 aaKnown RBP13.16□□□□□ -0.3
PUF60-218ENST00000531995 BAGE2Q86Y30 109 aa13.16□□□□□ -0.3
PUF60-218ENST00000531995 LINC00612Q8N6U2 182 aa13.16□□□□□ -0.3
PUF60-218ENST00000531995 NHLRC2Q8NBF2 726 aa13.16□□□□□ -0.3
PUF60-218ENST00000531995 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
PUF60-218ENST00000531995 IGKV3D-20A0A0C4DH25 116 aa13.15□□□□□ -0.3
PUF60-218ENST00000531995 FABP5P3A8MUU1 101 aa13.15□□□□□ -0.3
PUF60-218ENST00000531995 ZNF674Q2M3X9 581 aa13.15□□□□□ -0.3
PUF60-218ENST00000531995 IBA57Q5T440 356 aaKnown RBP13.15□□□□□ -0.3
PUF60-218ENST00000531995 FAM159AQ6UWV7 190 aa13.15□□□□□ -0.3
PUF60-218ENST00000531995 MED9Q9NWA0 146 aa13.15□□□□□ -0.3
PUF60-218ENST00000531995 NAGKQ9UJ70 344 aa13.15□□□□□ -0.3
PUF60-218ENST00000531995 TRBV20OR9-2A0A075B6H5 130 aa13.14□□□□□ -0.31
PUF60-218ENST00000531995 TYMSP04818 313 aa13.14□□□□□ -0.31
PUF60-218ENST00000531995 TCL1AP56279 114 aa13.14□□□□□ -0.31
PUF60-218ENST00000531995 TOR2AQ5JU69 321 aa13.14□□□□□ -0.31
PUF60-218ENST00000531995 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
PUF60-218ENST00000531995 SH2D1AO60880 128 aa13.13□□□□□ -0.31
PUF60-218ENST00000531995 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
PUF60-218ENST00000531995 DEFB131BA0A096LNP1 70 aa13.12□□□□□ -0.31
PUF60-218ENST00000531995 TEX48A0A1B0GUV7 120 aa13.12□□□□□ -0.31
PUF60-218ENST00000531995 SNURFLB1AK76 121 aa13.12□□□□□ -0.31
PUF60-218ENST00000531995 SPINK4O60575 86 aa13.12□□□□□ -0.31
PUF60-218ENST00000531995 CENPWQ5EE01 88 aa13.12□□□□□ -0.31
PUF60-218ENST00000531995 RYR1P21817 5038 aa13.11□□□□□ -0.31
PUF60-218ENST00000531995 C9JQL5 133 aa13.11□□□□□ -0.31
PUF60-218ENST00000531995 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
PUF60-218ENST00000531995 NDUFS6O75380 124 aaKnown RBP13.11□□□□□ -0.31
PUF60-218ENST00000531995 SRP19P09132 144 aaKnown RBP13.11□□□□□ -0.31
PUF60-218ENST00000531995 DEFB130BP0DP73 79 aa13.11□□□□□ -0.31
PUF60-218ENST00000531995 DEFB130AP0DP74 79 aa13.11□□□□□ -0.31
PUF60-218ENST00000531995 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
PUF60-218ENST00000531995 Q6ZTI0 123 aa13.11□□□□□ -0.31
PUF60-218ENST00000531995 KCNS1Q96KK3 526 aa13.11□□□□□ -0.31
PUF60-218ENST00000531995 EIF5A2Q9GZV4 153 aaKnown RBP13.11□□□□□ -0.31
PUF60-218ENST00000531995 TRGV11A0A075B6L2 103 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 PGPEP1LA6NFU8 196 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 KRBOX1C9JBD0 128 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 DAD1P61803 113 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 FAM162BQ5T6X4 162 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 SDF2L1Q9HCN8 221 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 PKD1P98161 4303 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 DNAH11Q96DT5 4516 aa13.1□□□□□ -0.31
PUF60-218ENST00000531995 GAGE12BA1L429 117 aa13.09□□□□□ -0.31
PUF60-218ENST00000531995 GAGE7O76087 117 aa13.09□□□□□ -0.31
PUF60-218ENST00000531995 GAGE12FP0CL80 117 aa13.09□□□□□ -0.31
PUF60-218ENST00000531995 GAGE12GP0CL81 117 aa13.09□□□□□ -0.31
PUF60-218ENST00000531995 GAGE12IP0CL82 117 aa13.09□□□□□ -0.31
PUF60-218ENST00000531995 ZNF415Q09FC8 603 aa13.09□□□□□ -0.31
PUF60-218ENST00000531995 PARLQ9H300 379 aa13.09□□□□□ -0.31
PUF60-218ENST00000531995 RNASE3P12724 160 aaKnown RBP13.08□□□□□ -0.32
PUF60-218ENST00000531995 M0R2N4 97 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 ORM1P02763 201 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 GNG4P50150 75 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 DNLZQ5SXM8 178 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 OCC1Q8TAD7 63 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 C9orf85Q96MD7 179 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 SPXQ9BT56 116 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 NDUFAF3Q9BU61 184 aa13.07□□□□□ -0.32
PUF60-218ENST00000531995 MRPL16Q9NX20 251 aaKnown RBP13.07□□□□□ -0.32
PUF60-218ENST00000531995 TRGV1A0A0A0MS02 117 aa13.06□□□□□ -0.32
PUF60-218ENST00000531995 C19orf71A6NCJ1 209 aa13.06□□□□□ -0.32
PUF60-218ENST00000531995 B4DEV8 164 aa13.06□□□□□ -0.32
PUF60-218ENST00000531995 C9JCJ5 164 aa13.06□□□□□ -0.32
PUF60-218ENST00000531995 M0R036 132 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms