RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 NAGKQ9UJ70 344 aa12.16□□□□□ -0.46
SF3B2-211ENST00000531041 LY96Q9Y6Y9 160 aa12.16□□□□□ -0.46
SF3B2-211ENST00000531041 PLAC8L1A1L4L8 177 aa12.15□□□□□ -0.46
SF3B2-211ENST00000531041 MGST1P10620 155 aaKnown RBP12.15□□□□□ -0.46
SF3B2-211ENST00000531041 IBA57Q5T440 356 aaKnown RBP12.15□□□□□ -0.46
SF3B2-211ENST00000531041 UQCC3Q6UW78 93 aa12.15□□□□□ -0.46
SF3B2-211ENST00000531041 TP53TG3Q9ULZ0 132 aa12.15□□□□□ -0.46
SF3B2-211ENST00000531041 IGKV3D-20A0A0C4DH25 116 aa12.14□□□□□ -0.47
SF3B2-211ENST00000531041 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
SF3B2-211ENST00000531041 PRR27Q6MZM9 219 aa12.14□□□□□ -0.47
SF3B2-211ENST00000531041 C11orf72Q8NBR9 251 aa12.14□□□□□ -0.47
SF3B2-211ENST00000531041 SDF2L1Q9HCN8 221 aa12.14□□□□□ -0.47
SF3B2-211ENST00000531041 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
SF3B2-211ENST00000531041 ORM1P02763 201 aa12.13□□□□□ -0.47
SF3B2-211ENST00000531041 C19orf71A6NCJ1 209 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 KRBOX1C9JBD0 128 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 K7EN84 100 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 GNRH2O43555 120 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 TYMSP04818 313 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 EMP1P54849 157 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 OR5I1Q13606 314 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 COMMD7Q86VX2 200 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 TIMM8BQ9Y5J9 83 aaPredicted RBP12.12□□□□□ -0.47
SF3B2-211ENST00000531041 MUC4Q99102 2169 aa12.12□□□□□ -0.47
SF3B2-211ENST00000531041 SNURFLB1AK76 121 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 B4DEV8 164 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 SFTA3P0C7M3 94 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 TCL1AP56279 114 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
SF3B2-211ENST00000531041 TMEM241Q24JQ0 296 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 DAZAP1Q96EP5 407 aaKnown RBP12.11□□□□□ -0.47
SF3B2-211ENST00000531041 GSN-AS1Q9NRJ2 163 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 MDFICQ9P1T7 246 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 DKK2Q9UBU2 259 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 LYRM9A8MSI8 78 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 M0R036 132 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 NAT8Q9UHE5 227 aa12.11□□□□□ -0.47
SF3B2-211ENST00000531041 TEX48A0A1B0GUV7 120 aa12.1□□□□□ -0.47
SF3B2-211ENST00000531041 SPART-AS1P0CW21 52 aa12.1□□□□□ -0.47
SF3B2-211ENST00000531041 DNLZQ5SXM8 178 aa12.1□□□□□ -0.47
SF3B2-211ENST00000531041 FAM222AQ5U5X8 452 aa12.1□□□□□ -0.47
SF3B2-211ENST00000531041 NOP10Q9NPE3 64 aaKnown RBP12.1□□□□□ -0.47
SF3B2-211ENST00000531041 CELA1Q9UNI1 258 aa12.1□□□□□ -0.47
SF3B2-211ENST00000531041 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
SF3B2-211ENST00000531041 C11orf45Q8TAV5 145 aa12.09□□□□□ -0.47
SF3B2-211ENST00000531041 SPXQ9BT56 116 aa12.09□□□□□ -0.47
SF3B2-211ENST00000531041 P01737 135 aa12.08□□□□□ -0.48
SF3B2-211ENST00000531041 CXCL1P09341 107 aa12.08□□□□□ -0.48
SF3B2-211ENST00000531041 RNASE3P12724 160 aaKnown RBP12.08□□□□□ -0.48
SF3B2-211ENST00000531041 RPL23P62829 140 aaKnown RBP12.08□□□□□ -0.48
SF3B2-211ENST00000531041 FAM231DQ6ZW35 169 aa12.08□□□□□ -0.48
SF3B2-211ENST00000531041 NUDT10Q8NFP7 164 aa12.08□□□□□ -0.48
SF3B2-211ENST00000531041 NUDT11Q96G61 164 aa12.08□□□□□ -0.48
SF3B2-211ENST00000531041 TMEM218A2RU14 115 aa12.07□□□□□ -0.48
SF3B2-211ENST00000531041 ASIPP42127 132 aa12.07□□□□□ -0.48
SF3B2-211ENST00000531041 RPL19P84098 196 aaKnown RBP12.07□□□□□ -0.48
SF3B2-211ENST00000531041 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
SF3B2-211ENST00000531041 C9orf85Q96MD7 179 aa12.07□□□□□ -0.48
SF3B2-211ENST00000531041 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
SF3B2-211ENST00000531041 RNASE7Q9H1E1 156 aaKnown RBP12.07□□□□□ -0.48
SF3B2-211ENST00000531041 TMSB15BA0A087X1C1 80 aa12.06□□□□□ -0.48
SF3B2-211ENST00000531041 SPINK4O60575 86 aa12.06□□□□□ -0.48
SF3B2-211ENST00000531041 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
SF3B2-211ENST00000531041 LINC00612Q8N6U2 182 aa12.06□□□□□ -0.48
SF3B2-211ENST00000531041 OR2D3Q8NGH3 330 aa12.06□□□□□ -0.48
SF3B2-211ENST00000531041 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
SF3B2-211ENST00000531041 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
SF3B2-211ENST00000531041 GRIFINA4D1Z8 144 aa12.05□□□□□ -0.48
SF3B2-211ENST00000531041 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
SF3B2-211ENST00000531041 RPS20P60866 119 aaKnown RBP12.05□□□□□ -0.48
SF3B2-211ENST00000531041 ADIRFQ15847 76 aa12.05□□□□□ -0.48
SF3B2-211ENST00000531041 C12orf74Q32Q52 190 aa12.05□□□□□ -0.48
SF3B2-211ENST00000531041 OSTCQ9NRP0 149 aa12.05□□□□□ -0.48
SF3B2-211ENST00000531041 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
SF3B2-211ENST00000531041 XKRY2A2RUG3 117 aa12.04□□□□□ -0.48
SF3B2-211ENST00000531041 M0R2P5 195 aa12.04□□□□□ -0.48
SF3B2-211ENST00000531041 NANOS2P60321 138 aaKnown RBP12.04□□□□□ -0.48
SF3B2-211ENST00000531041 Q6ZTI0 123 aa12.04□□□□□ -0.48
SF3B2-211ENST00000531041 RPP21Q9H633 154 aaKnown RBP12.04□□□□□ -0.48
SF3B2-211ENST00000531041 F8W036 122 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 H3BVH4 76 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 ARMS2P0C7Q2 107 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 DEFB130BP0DP73 79 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 DEFB130AP0DP74 79 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 MED14OSP0DP75 135 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 DAD1P61803 113 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 PNRC1Q12796 327 aaPredicted RBP12.03□□□□□ -0.48
SF3B2-211ENST00000531041 RASL10AQ92737 203 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 PTH2Q96A98 100 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 SEC11CQ9BY50 192 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 TRGV1A0A0A0MS02 117 aa12.03□□□□□ -0.48
SF3B2-211ENST00000531041 GATCO43716 136 aaKnown RBP12.03□□□□□ -0.48
SF3B2-211ENST00000531041 ADCYAP1P18509 176 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms