RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 RPL18AQ02543 176 aaKnown RBP5.76□□□□□ -1.49
CTNND1-229ENST00000531014 SPINK13Q1W4C9 94 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 KLK9Q9UKQ9 250 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 PAX9P55771 341 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 MYO16Q9Y6X6 1858 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 IGHV1-69DA0A0B4J2H0 117 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 LY6G6EA0A0G2JKS1 128 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV1-39P01597 117 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV1D-39P04432 117 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 U3KQA8 63 aa5.76□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV1OR2-108A0A075B7D4 117 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV1D-43A0A0B4J1Z2 117 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 OVOL3O00110 214 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 LOXL1Q08397 574 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 KLHL30-AS1Q8NEE0 82 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 FGFBP3Q8TAT2 258 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 CAMK2N2Q96S95 79 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 MRPL36Q9P0J6 103 aaKnown RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV1-9A0A0C4DH69 117 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 MBD3L4A6NDZ8 208 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 MBD3L3A6NE82 208 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 MBD3L5A6NJ08 208 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 NDUFA7O95182 113 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 MST1P26927 711 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 MBD3L2Q8NHZ7 208 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 SVILO95425 2214 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 IGHV1-8P0DP01 117 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 CLPSL2Q6UWE3 100 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 PAQR4Q8N4S7 273 aaPredicted RBP5.75□□□□□ -1.49
CTNND1-229ENST00000531014 HIGD1BQ9P298 99 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 SMIM26A0A096LP01 95 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 A0A0G2JNJ9 132 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 H0YJW9 148 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 IGLC6P0CF74 106 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 PRR25Q96S07 402 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 Q9UFV3 132 aa5.75□□□□□ -1.49
CTNND1-229ENST00000531014 ARFGEF3Q5TH69 2177 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 DOCK10Q96BY6 2186 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 NUP210Q8TEM1 1887 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV1-8A0A0C4DH67 115 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 IGHV1-2P23083 117 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 MDC1Q14676 2089 aaKnown RBP5.74□□□□□ -1.49
CTNND1-229ENST00000531014 PSPNO60542 156 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 VMO1Q7Z5L0 202 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 DIRC1Q969H9 104 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 WT1P19544 449 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-229ENST00000531014 IGLV3-21P80748 117 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-229ENST00000531014 SERTAD4-AS1Q5TG53 156 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 IL17DQ8TAD2 202 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 WISP3O95389 354 aaPredicted RBP5.74□□□□□ -1.49
CTNND1-229ENST00000531014 Q8N9L7 120 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 FANCD2OSQ96PS1 177 aa5.74□□□□□ -1.49
CTNND1-229ENST00000531014 MST1LQ2TV78 715 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 C11orf52Q96A22 123 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 CYYR1Q96J86 154 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 FXYD2P54710 66 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 IGFL2Q6UWQ7 119 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 C5orf38Q86SI9 138 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 IGF2BP2-AS1Q96M15 143 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 CHCHD2Q9Y6H1 151 aaPredicted RBP5.73□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV2D-26A0A0A0MRZ7 120 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 H3BUX3 64 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 M0QXV9 152 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 CELA3BP08861 270 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 SRRM5B3KS81 715 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 MT-ATP8P03928 68 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 APOC4P55056 127 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 C16orf54Q6UWD8 224 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 SPTBN2O15020 2390 aa5.73□□□□□ -1.49
CTNND1-229ENST00000531014 TFF1P04155 84 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 GATA1P15976 413 aaPredicted RBP5.72□□□□□ -1.49
CTNND1-229ENST00000531014 ZNF672Q499Z4 452 aaPredicted RBP5.72□□□□□ -1.49
CTNND1-229ENST00000531014 CLEC2BQ92478 149 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 C9orf106Q8NAJ2 232 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 ALPK3Q96L96 1907 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 MTCL1Q9Y4B5 1905 aaKnown RBP5.72□□□□□ -1.49
CTNND1-229ENST00000531014 FAM208BQ5VWN6 2430 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 IGHV4-30-2A0A087WSY4 118 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 TMEM200BQ69YZ2 307 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 SHISA2Q6UWI4 295 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 SDIM1Q6ZPB5 146 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 SERP2Q8N6R1 65 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 WI2-2373I1.2A0A1W2PRP0 233 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 RFPL3SP0C7P2 107 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 SMIM10L1P0DMW3 83 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 ZNF134P52741 427 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 SMIM10Q96HG1 83 aa5.72□□□□□ -1.49
CTNND1-229ENST00000531014 COX7A2LO14548 114 aa5.71□□□□□ -1.49
CTNND1-229ENST00000531014 HRCT1Q6UXD1 115 aa5.71□□□□□ -1.49
CTNND1-229ENST00000531014 SEM1Q6ZVN7 128 aa5.71□□□□□ -1.49
CTNND1-229ENST00000531014 FGF23Q9GZV9 251 aaPredicted RBP5.71□□□□□ -1.49
CTNND1-229ENST00000531014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.71□□□□□ -1.5
CTNND1-229ENST00000531014 A0A096LPF7 62 aa5.71□□□□□ -1.5
CTNND1-229ENST00000531014 IGKV2-29A2NJV5 120 aaPredicted RBP5.71□□□□□ -1.5
CTNND1-229ENST00000531014 Q8N1Y9 231 aa5.71□□□□□ -1.5
CTNND1-229ENST00000531014 MRPL53Q96EL3 112 aaKnown RBP5.71□□□□□ -1.5
CTNND1-229ENST00000531014 POLEQ07864 2286 aa5.71□□□□□ -1.5
CTNND1-229ENST00000531014 TRBV6-6A0A0A6YYG2 114 aa5.71□□□□□ -1.5
CTNND1-229ENST00000531014 RBAKDNA6NC62 111 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms