RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SMIM2Q9BVW6 85 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 CTSZQ9UBR2 303 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 TRGV11A0A075B6L2 103 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-214ENST00000530886 UCNP55089 124 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 C10orf55Q5SWW7 151 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 C2orf48Q96LS8 159 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 LAMA5O15230 3695 aa6.25□□□□□ -1.41
CSDE1-214ENST00000530886 TIMM8AO60220 97 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-214ENST00000530886 IGKV3-15P01624 115 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 ZNF80P51504 273 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-214ENST00000530886 MFAP4P55083 255 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 HIST1H4AP62805 103 aaKnown RBP6.24□□□□□ -1.41
CSDE1-214ENST00000530886 DKK4Q9UBT3 224 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 ARFGEF3Q5TH69 2177 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 SVEP1Q4LDE5 3571 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 A0A0G2JNJ9 132 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 F5H768 121 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 GATA4P43694 442 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 PMVKQ15126 192 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 C3orf56Q8N813 242 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 Q9UFV3 132 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 TRAV17A0A0B4J275 112 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 C17orf100A8MU93 164 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 F8WDY8 70 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 TMEM258P61165 79 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 IL11RAQ14626 422 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 MSMPQ1L6U9 139 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 VMA21Q3ZAQ7 101 aa6.24□□□□□ -1.41
CSDE1-214ENST00000530886 DNAJC13O75165 2243 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 C11orf86A6NJI1 115 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 H7C423 109 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 I3L2K1 104 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 Q6ZS46 218 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 METTL26Q96S19 204 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 TACC2O95359 2948 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 IGLV4-69A0A075B6H9 119 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 M0R3E3 92 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 EMP1P54849 157 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 C2orf82Q6UX34 121 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 LINC00311Q8N616 119 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 OVOL1O14753 267 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 IGKV1-17P01599 117 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 CD59P13987 128 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 MAGEA5P43359 124 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 SLC50A1Q9BRV3 221 aa6.23□□□□□ -1.41
CSDE1-214ENST00000530886 PRRC2CQ9Y520 2896 aaKnown RBP6.22□□□□□ -1.41
CSDE1-214ENST00000530886 SVILO95425 2214 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 IGHV1-69DA0A0B4J2H0 117 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 A0A0J9YX75 114 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 K7ESF4 209 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 ELANEP08246 267 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 GAGE2AQ6NT46 116 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 KLHL30-AS1Q8NEE0 82 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 DUX5Q96PT3 197 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 EDA2RQ9HAV5 297 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 ZNRD1Q9P1U0 126 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 IGHV1-2P23083 117 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 DUX4L9Q6RFH8 374 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-214ENST00000530886 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 DCHS2Q6V1P9 2916 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 SPINK14Q6IE38 97 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 ZNF491Q8N8L2 437 aa6.22□□□□□ -1.41
CSDE1-214ENST00000530886 CACNA1GO43497 2377 aa6.21□□□□□ -1.41
CSDE1-214ENST00000530886 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 NTN3O00634 580 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-214ENST00000530886 TCF15Q12870 199 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-214ENST00000530886 HES7Q9BYE0 225 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 PLXNB1O43157 2135 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 K7ENP7 123 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 Q5XG85 94 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 HCP5Q6MZN7 132 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 SAP25Q8TEE9 199 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 GAFA1Q96PS6 74 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 DUX3Q96PT4 197 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 LINC00527Q9UJ94 153 aa6.21□□□□□ -1.42
CSDE1-214ENST00000530886 M0R381 172 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 IGLV1-44P01699 117 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 TRGV3P03979 118 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 RPL27AP46776 148 aaKnown RBP6.2□□□□□ -1.42
CSDE1-214ENST00000530886 RNF125Q96EQ8 232 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 TTTY12Q9BZ98 90 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 IGHV7-4-1A0A0J9YVY3 117 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 TEX22C9J3V5 150 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 TRIAP1O43715 76 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 ORM1P02763 201 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 FOLR3P41439 243 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 TSPEAR-AS2P59090 65 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 C2orf66Q6UXQ4 117 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 FAM216BQ8N7L0 139 aa6.2□□□□□ -1.42
CSDE1-214ENST00000530886 C1orf162Q8NEQ5 155 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-214ENST00000530886 KLK5Q9Y337 293 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-214ENST00000530886 KIAA0100Q14667 2235 aaKnown RBP6.2□□□□□ -1.42
CSDE1-214ENST00000530886 IGKV2-40A0A087WW87 121 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-214ENST00000530886 SDHAF1A6NFY7 115 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms