RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 FAM236BA0A1B0GV22 79 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 LGALS9O00182 355 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 NPFFO15130 113 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 BAALCQ8WXS3 180 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 DUX3Q96PT4 197 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 CNFNQ9BYD5 112 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 RPL27AP46776 148 aaKnown RBP10.89□□□□□ -0.67
PCF11-204ENST00000530660 PLGLAQ15195 96 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 LINC01620Q4KN68 170 aa10.89□□□□□ -0.67
PCF11-204ENST00000530660 TRGV11A0A075B6L2 103 aa10.88□□□□□ -0.67
PCF11-204ENST00000530660 TRAV25A0A0B4J276 109 aa10.88□□□□□ -0.67
PCF11-204ENST00000530660 CD40P25942 277 aa10.88□□□□□ -0.67
PCF11-204ENST00000530660 VMA21Q3ZAQ7 101 aa10.88□□□□□ -0.67
PCF11-204ENST00000530660 HERVK_113P63121 156 aa10.88□□□□□ -0.67
PCF11-204ENST00000530660 GAFA1Q96PS6 74 aa10.88□□□□□ -0.67
PCF11-204ENST00000530660 PSMG3-AS1Q96PY0 264 aa10.88□□□□□ -0.67
PCF11-204ENST00000530660 A4D1N5 150 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 H3BMM0 161 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 DEFB104AQ8WTQ1 72 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 UBE2WQ96B02 151 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 TIMD4Q96H15 378 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 HES1Q14469 280 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 ATP1A1-AS1Q5TC04 95 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 EDA2RQ9HAV5 297 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 NDUFA7O95182 113 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 IGLV1-44P01699 117 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 IGHV3-33P01772 117 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 TSPEAR-AS2P59090 65 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 C14orf178Q8N769 122 aaPredicted RBP10.87□□□□□ -0.67
PCF11-204ENST00000530660 ZNF491Q8N8L2 437 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 ARHGAP32A7KAX9 2087 aa10.87□□□□□ -0.67
PCF11-204ENST00000530660 Q1RN00 199 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 IL17RELQ6ZVW7 336 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 RNF125Q96EQ8 232 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 SIT1Q9Y3P8 196 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 B9A039 149 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 ZNF22P17026 224 aaPredicted RBP10.86□□□□□ -0.67
PCF11-204ENST00000530660 WT1P19544 449 aaPredicted RBP10.86□□□□□ -0.67
PCF11-204ENST00000530660 RPL13AP40429 203 aaKnown RBP10.86□□□□□ -0.67
PCF11-204ENST00000530660 PVRIGQ6DKI7 326 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 C9orf106Q8NAJ2 232 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 ERCC8Q13216 396 aa10.86□□□□□ -0.67
PCF11-204ENST00000530660 RBAKDNA6NC62 111 aa10.85□□□□□ -0.67
PCF11-204ENST00000530660 CFHR4Q92496 578 aa10.85□□□□□ -0.67
PCF11-204ENST00000530660 MUC3AQ02505 3323 aa10.85□□□□□ -0.67
PCF11-204ENST00000530660 C11orf86A6NJI1 115 aa10.85□□□□□ -0.67
PCF11-204ENST00000530660 A0A1W2PNU3 283 aaPredicted RBP10.84□□□□□ -0.67
PCF11-204ENST00000530660 I3L2K1 104 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 M0R2P5 195 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 PMVKQ15126 192 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 SLC25A29Q8N8R3 303 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 TMEM101Q96IK0 257 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 LINC00574Q9H8X3 128 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 SPRY2O43597 315 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 PRB3Q04118 309 aaPredicted RBP10.84□□□□□ -0.67
PCF11-204ENST00000530660 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 RNF7Q9UBF6 113 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 ATXN8Q156A1 80 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 C2orf82Q6UX34 121 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 TOMM6Q96B49 74 aa10.84□□□□□ -0.67
PCF11-204ENST00000530660 CD3EP07766 207 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 HERVK_113P61574 105 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 C11orf21Q9P2W6 132 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 M0R1B8 84 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 C2orf66Q6UXQ4 117 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 IGKV3D-20A0A0C4DH25 116 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 TRBV10-2A0A0K0K1G8 114 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 J3KT08 172 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 C3orf22Q8N5N4 141 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 TMEM263Q8WUH6 116 aaKnown RBP10.83□□□□□ -0.68
PCF11-204ENST00000530660 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.68
PCF11-204ENST00000530660 POM121L12Q8N7R1 296 aa10.82□□□□□ -0.68
PCF11-204ENST00000530660 C1orf162Q8NEQ5 155 aaPredicted RBP10.82□□□□□ -0.68
PCF11-204ENST00000530660 TEX22C9J3V5 150 aa10.82□□□□□ -0.68
PCF11-204ENST00000530660 TM4SF5O14894 197 aa10.82□□□□□ -0.68
PCF11-204ENST00000530660 DLX1P56177 255 aa10.82□□□□□ -0.68
PCF11-204ENST00000530660 MAP1BP46821 2468 aaKnown RBP10.82□□□□□ -0.68
PCF11-204ENST00000530660 LPAL2Q16609 132 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 PKDREJQ9NTG1 2253 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 BOD1L1Q8NFC6 3051 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 TRBV7-7A0A0K0K1E9 115 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 CRYGDP07320 174 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 DYNAPQ8N1N2 210 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 RPL39LQ96EH5 51 aaKnown RBP10.81□□□□□ -0.68
PCF11-204ENST00000530660 IGHV3OR16-8A0A075B7F1 116 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 TNFAIP6P98066 277 aaPredicted RBP10.81□□□□□ -0.68
PCF11-204ENST00000530660 PDE6HQ13956 83 aa10.81□□□□□ -0.68
PCF11-204ENST00000530660 POLEQ07864 2286 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 PRAC2D3DTV9 90 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 P0DMU3 169 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 FAM231AP0DMU4 169 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 FAM231CP0DMU5 169 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 LY6DQ14210 128 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 EBI3Q14213 229 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 ZNF672Q499Z4 452 aaPredicted RBP10.8□□□□□ -0.68
PCF11-204ENST00000530660 SLC25A15Q9Y619 301 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 H7C423 109 aa10.8□□□□□ -0.68
PCF11-204ENST00000530660 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
PCF11-204ENST00000530660 K7EIM0 57 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms