RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TRBV12-3P01733 135 aa9.64□□□□□ -0.87
SCN3B-206ENST00000530277 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
SCN3B-206ENST00000530277 LGALS3P17931 250 aaKnown RBP9.64□□□□□ -0.87
SCN3B-206ENST00000530277 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
SCN3B-206ENST00000530277 LAGE3Q14657 143 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 KIR3DS1Q14943 382 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 SYT8Q8NBV8 401 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
SCN3B-206ENST00000530277 CSTL1Q9H114 145 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 ZNF815PA8K554 130 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 K7ERJ3 54 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 PDE6HQ13956 83 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 IGHV1-69DA0A0B4J2H0 117 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 IGHV1-69P01742 117 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 PPBPP02775 128 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 ANKRD39Q53RE8 183 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 Q8N9W7 124 aa9.63□□□□□ -0.87
SCN3B-206ENST00000530277 IGLV11-55A0A075B6I3 123 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 CIDEAO60543 219 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 ZNF80P51504 273 aaPredicted RBP9.62□□□□□ -0.87
SCN3B-206ENST00000530277 SRSF8Q9BRL6 282 aaKnown RBP9.62□□□□□ -0.87
SCN3B-206ENST00000530277 TMEM14CQ9P0S9 112 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 CHTOPQ9Y3Y2 248 aaKnown RBP9.62□□□□□ -0.87
SCN3B-206ENST00000530277 PCSK5Q92824 1860 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 A0A1B0GWB2 263 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 OOSP1A8MZH6 123 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 VWC2LB2RUY7 222 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 ZNF747Q9BV97 191 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 GFRA4Q9GZZ7 299 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
SCN3B-206ENST00000530277 DMDP11532 3685 aa9.62□□□□□ -0.87
SCN3B-206ENST00000530277 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 TRBV7-1A0A0A6YYK4 115 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 IGHV4-59P01825 116 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 RBX1P62877 108 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 OR11H6Q8NGC7 330 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 MSMBP08118 114 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 CT83Q5H943 113 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 IGHV3-16A0A0C4DH30 117 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 CENPVL3A0A0U1RRI6 287 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 IGHV4-39P01824 125 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 PHLDA1Q8WV24 401 aaPredicted RBP9.61□□□□□ -0.87
SCN3B-206ENST00000530277 TNFRSF18Q9Y5U5 241 aa9.61□□□□□ -0.87
SCN3B-206ENST00000530277 B4DSR2 109 aa9.6□□□□□ -0.87
SCN3B-206ENST00000530277 LINC00310P59036 64 aa9.6□□□□□ -0.87
SCN3B-206ENST00000530277 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
SCN3B-206ENST00000530277 UNQ9165/PRO28630Q6UXU0 137 aa9.6□□□□□ -0.87
SCN3B-206ENST00000530277 C9orf139Q6ZV77 190 aa9.6□□□□□ -0.87
SCN3B-206ENST00000530277 LRBAP50851 2863 aa9.6□□□□□ -0.87
SCN3B-206ENST00000530277 TRAV2A0A0B4J234 112 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 IGF1P05019 195 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 CDKN1BP46527 198 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 GEMIN7Q9H840 131 aaKnown RBP9.59□□□□□ -0.87
SCN3B-206ENST00000530277 HECTD1Q9ULT8 2610 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 CRYGCP07315 174 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 SUMO2P61956 95 aaKnown RBP9.59□□□□□ -0.87
SCN3B-206ENST00000530277 SAMD5Q5TGI4 173 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 RAX2Q96IS3 184 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 DAZ1Q9NQZ3 744 aaKnown RBP9.59□□□□□ -0.87
SCN3B-206ENST00000530277 DEFB131AP59861 70 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 MBD6Q96DN6 1003 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 RPL39LQ96EH5 51 aaKnown RBP9.59□□□□□ -0.87
SCN3B-206ENST00000530277 MS4A6AQ9H2W1 248 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
SCN3B-206ENST00000530277 MRPS16Q9Y3D3 137 aaKnown RBP9.59□□□□□ -0.87
SCN3B-206ENST00000530277 AMTNQ6UX39 209 aa9.58□□□□□ -0.88
SCN3B-206ENST00000530277 BUB3O43684 328 aa9.58□□□□□ -0.88
SCN3B-206ENST00000530277 C1orf122Q6ZSJ8 110 aa9.58□□□□□ -0.88
SCN3B-206ENST00000530277 PRSS22Q9GZN4 317 aa9.58□□□□□ -0.88
SCN3B-206ENST00000530277 COL4A2P08572 1712 aa9.58□□□□□ -0.88
SCN3B-206ENST00000530277 OVOL1O14753 267 aa9.58□□□□□ -0.88
SCN3B-206ENST00000530277 ZNF479Q96JC4 524 aa9.58□□□□□ -0.88
SCN3B-206ENST00000530277 HSD52Q0P140 79 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 IGF2-ASQ6U949 168 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 Q6ZQT7 251 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 K7EP13 123 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 CHAC1Q9BUX1 264 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 VCX2Q9H322 139 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 DPH3P1Q9H4G8 78 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 KLF12Q9Y4X4 402 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 IGHV3-38A0A0C4DH36 116 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 BVES-AS1Q5T3Y7 98 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 C2orf66Q6UXQ4 117 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 C8orf31Q8N9H6 132 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
SCN3B-206ENST00000530277 LINC00574Q9H8X3 128 aa9.57□□□□□ -0.88
SCN3B-206ENST00000530277 C2orf70A6NJV1 201 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 NPIPB6E9PJ23 425 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 CRIP1P50238 77 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 C19orf71A6NCJ1 209 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 RRN3P1Q2M238 152 aa9.56□□□□□ -0.88
SCN3B-206ENST00000530277 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms