RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 CST9LP1Q5W188 147 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 EIF5AL1Q6IS14 154 aaKnown RBP11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 TMEM183AQ8IXX5 376 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
TSPAN4-218ENST00000529566 IGHV3-16A0A0C4DH30 117 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 GCGP01275 180 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 ZNF415Q09FC8 603 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 ZFP69Q49AA0 526 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 SMUG1Q53HV7 270 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 COX8CQ7Z4L0 72 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 Q86TA4 180 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 NAGKQ9UJ70 344 aa11.29□□□□□ -0.6
TSPAN4-218ENST00000529566 TRGV11A0A075B6L2 103 aa11.28□□□□□ -0.6
TSPAN4-218ENST00000529566 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
TSPAN4-218ENST00000529566 TYMSP04818 313 aa11.28□□□□□ -0.6
TSPAN4-218ENST00000529566 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
TSPAN4-218ENST00000529566 PPT1P50897 306 aa11.28□□□□□ -0.6
TSPAN4-218ENST00000529566 C15orf53Q8NAA6 179 aa11.28□□□□□ -0.6
TSPAN4-218ENST00000529566 MRPL16Q9NX20 251 aaKnown RBP11.28□□□□□ -0.6
TSPAN4-218ENST00000529566 MUC4Q99102 2169 aa11.27□□□□□ -0.6
TSPAN4-218ENST00000529566 TRGV2A0A075B6R0 118 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 P0DMU3 169 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 FAM231AP0DMU4 169 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 FAM231CP0DMU5 169 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 CRIP1P50238 77 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 POM121L12Q8N7R1 296 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 RASL10AQ92737 203 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 FMC1Q96HJ9 113 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 KCNS1Q96KK3 526 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 SPXQ9BT56 116 aa11.27□□□□□ -0.61
TSPAN4-218ENST00000529566 LTAP01374 205 aa11.26□□□□□ -0.61
TSPAN4-218ENST00000529566 OR5I1Q13606 314 aa11.26□□□□□ -0.61
TSPAN4-218ENST00000529566 SDF2L1Q9HCN8 221 aa11.26□□□□□ -0.61
TSPAN4-218ENST00000529566 ZFP30Q9Y2G7 519 aa11.26□□□□□ -0.61
TSPAN4-218ENST00000529566 DNAH10Q8IVF4 4471 aa11.26□□□□□ -0.61
TSPAN4-218ENST00000529566 TRAV26-1A0A087WT03 109 aa11.25□□□□□ -0.61
TSPAN4-218ENST00000529566 NKX2-5P52952 324 aaPredicted RBP11.25□□□□□ -0.61
TSPAN4-218ENST00000529566 ZC2HC1AQ96GY0 325 aa11.25□□□□□ -0.61
TSPAN4-218ENST00000529566 EPPK1P58107 5090 aaKnown RBP11.24□□□□□ -0.61
TSPAN4-218ENST00000529566 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
TSPAN4-218ENST00000529566 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
TSPAN4-218ENST00000529566 H3BNG1 76 aa11.24□□□□□ -0.61
TSPAN4-218ENST00000529566 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
TSPAN4-218ENST00000529566 VSIG2Q96IQ7 327 aa11.24□□□□□ -0.61
TSPAN4-218ENST00000529566 GNG13Q9P2W3 67 aa11.24□□□□□ -0.61
TSPAN4-218ENST00000529566 A0A0J9YY99 117 aa11.23□□□□□ -0.61
TSPAN4-218ENST00000529566 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
TSPAN4-218ENST00000529566 M0R2P5 195 aa11.23□□□□□ -0.61
TSPAN4-218ENST00000529566 UBE2G1P62253 170 aa11.23□□□□□ -0.61
TSPAN4-218ENST00000529566 FHL2Q14192 279 aa11.23□□□□□ -0.61
TSPAN4-218ENST00000529566 RNF212Q495C1 297 aa11.23□□□□□ -0.61
TSPAN4-218ENST00000529566 MANBALQ9NQG1 85 aa11.23□□□□□ -0.61
TSPAN4-218ENST00000529566 NUDT3O95989 172 aa11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 S100A9P06702 114 aaKnown RBP11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 AKR1C3P42330 323 aa11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 C9orf85Q96MD7 179 aa11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
TSPAN4-218ENST00000529566 SH2D1AO60880 128 aa11.21□□□□□ -0.61
TSPAN4-218ENST00000529566 ZNF674Q2M3X9 581 aa11.21□□□□□ -0.61
TSPAN4-218ENST00000529566 C11orf52Q96A22 123 aa11.21□□□□□ -0.61
TSPAN4-218ENST00000529566 ZNF479Q96JC4 524 aa11.21□□□□□ -0.61
TSPAN4-218ENST00000529566 MLST8Q9BVC4 326 aa11.21□□□□□ -0.61
TSPAN4-218ENST00000529566 KRBOX1C9JBD0 128 aa11.2□□□□□ -0.62
TSPAN4-218ENST00000529566 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
TSPAN4-218ENST00000529566 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
TSPAN4-218ENST00000529566 ALKAL2Q6UX46 152 aa11.2□□□□□ -0.62
TSPAN4-218ENST00000529566 PTH2Q96A98 100 aa11.2□□□□□ -0.62
TSPAN4-218ENST00000529566 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
TSPAN4-218ENST00000529566 DNAH2Q9P225 4427 aa11.19□□□□□ -0.62
TSPAN4-218ENST00000529566 SFTA3P0C7M3 94 aa11.19□□□□□ -0.62
TSPAN4-218ENST00000529566 NHLRC2Q8NBF2 726 aa11.19□□□□□ -0.62
TSPAN4-218ENST00000529566 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
TSPAN4-218ENST00000529566 A0A096LPF7 62 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 ORM1P02763 201 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 CRYBA4P53673 196 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 FAM3BP58499 235 aaPredicted RBP11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 DNLZQ5SXM8 178 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 UBE2DNLQ8IWF7 75 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 LYPD6BQ8NI32 183 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 PRO0255Q9UI72 69 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 HHLA3Q9XRX5 114 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 LINC00588Q9Y4M8 146 aa11.18□□□□□ -0.62
TSPAN4-218ENST00000529566 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
TSPAN4-218ENST00000529566 B4DEV8 164 aa11.17□□□□□ -0.62
TSPAN4-218ENST00000529566 PAX4O43316 350 aa11.17□□□□□ -0.62
TSPAN4-218ENST00000529566 BCL2P10415 239 aa11.17□□□□□ -0.62
TSPAN4-218ENST00000529566 MEF2BQ02080 365 aaPredicted RBP11.17□□□□□ -0.62
TSPAN4-218ENST00000529566 SLAQ13239 276 aa11.17□□□□□ -0.62
TSPAN4-218ENST00000529566 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
TSPAN4-218ENST00000529566 C9JCJ5 164 aa11.16□□□□□ -0.62
TSPAN4-218ENST00000529566 ESRGQ1W209 222 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms