RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	PROK1	P58294	105 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	COX8C	Q7Z4L0	72 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	MYOZ3	Q8TDC0	251 aa		11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	MCRIP2	Q9BUT9	160 aa	Known RBP	11.17	□□□□□ -0.62
NR1H3-231	ENST00000529540	GNG7	O60262	68 aa		11.16	□□□□□ -0.62
NR1H3-231	ENST00000529540	CRIP1	P50238	77 aa		11.16	□□□□□ -0.62
NR1H3-231	ENST00000529540	PDE6H	Q13956	83 aa		11.16	□□□□□ -0.62
NR1H3-231	ENST00000529540	RNF151	Q2KHN1	245 aa		11.16	□□□□□ -0.62
NR1H3-231	ENST00000529540	ERAS	Q7Z444	233 aa		11.16	□□□□□ -0.62
NR1H3-231	ENST00000529540	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.16	□□□□□ -0.62
NR1H3-231	ENST00000529540	TRAV8-6	A0A0B4J262	113 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540		H0Y8G0	127 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540		H3BRM9	83 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	SIVA1	O15304	175 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	SMIM15	Q7Z3B0	74 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	S100A7A	Q86SG5	101 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	OR9G4	Q8NGQ1	327 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	ZNF502	Q8TBZ5	544 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	ZNF414	Q96IQ9	312 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	KLK15	Q9H2R5	256 aa		11.15	□□□□□ -0.62
NR1H3-231	ENST00000529540	C7orf71	A4D174	169 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	FAM104B	Q5XKR9	115 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	BOD1L2	Q8IYS8	172 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	ZNF491	Q8N8L2	437 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	TMEM158	Q8WZ71	300 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	SIGLEC8	Q9NYZ4	499 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	CUBN	O60494	3623 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540		A6NDN8	102 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	FBLL1	A6NHQ2	334 aa	Known RBP	11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	CT45A10	P0DMU9	189 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	IFI27	P40305	119 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	HSD52	Q0P140	79 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	UFSP1	Q6NVU6	142 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	RNF125	Q96EQ8	232 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	C17orf77	Q96MU5	243 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	PRELID3A	Q96N28	172 aa		11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.14	□□□□□ -0.63
NR1H3-231	ENST00000529540	C9orf118	A6NHY6	69 aa		11.13	□□□□□ -0.63
NR1H3-231	ENST00000529540		K7ERU9	68 aa		11.13	□□□□□ -0.63
NR1H3-231	ENST00000529540	SRSF2	Q01130	221 aa	Known RBP	11.13	□□□□□ -0.63
NR1H3-231	ENST00000529540	C10orf99	Q6UWK7	81 aa		11.13	□□□□□ -0.63
NR1H3-231	ENST00000529540	PRIMA1	Q86XR5	153 aa		11.13	□□□□□ -0.63
NR1H3-231	ENST00000529540	ORMDL3	Q8N138	153 aa		11.13	□□□□□ -0.63
NR1H3-231	ENST00000529540	TMEM189	A5PLL7	270 aa		11.12	□□□□□ -0.63
NR1H3-231	ENST00000529540		D6R8Y8	96 aa		11.12	□□□□□ -0.63
NR1H3-231	ENST00000529540	LGALS1	P09382	135 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-231	ENST00000529540	PSMG4	Q5JS54	123 aa		11.12	□□□□□ -0.63
NR1H3-231	ENST00000529540	KHDC1L	Q5JSQ8	128 aa		11.12	□□□□□ -0.63
NR1H3-231	ENST00000529540	C4orf3	Q8WVX3	66 aa		11.12	□□□□□ -0.63
NR1H3-231	ENST00000529540	GAGE12B	A1L429	117 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	SH2D1A	O60880	128 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	HBD	P02042	147 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	CLEC3B	P05452	202 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	LYZL1	Q6UWQ5	148 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	GTF2H5	Q6ZYL4	71 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	CCDC140	Q96MF4	163 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	VPS25	Q9BRG1	176 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	TEP1	Q99973	2627 aa	Known RBP	11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	LINC01546	A6NGU7	62 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	KRTAP24-1	Q3LI83	254 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	FAM106A	Q4KMX7	169 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	MRPL51	Q4U2R6	128 aa	Known RBP	11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	CLEC19A	Q6UXS0	136 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	OR8A1	Q8NGG7	326 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	C8orf49	Q96NF6	230 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	AAMDC	Q9H7C9	122 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	RABAC1	Q9UI14	185 aa		11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.11	□□□□□ -0.63
NR1H3-231	ENST00000529540	GAGE10	A6NGK3	116 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540		K7EP34	96 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540	IGHV3-11	P01762	117 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540	IL4	P05112	153 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540	S100A7	P31151	101 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540	ARL3	P36405	182 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540	TCTEX1D4	Q5JR98	221 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540	LCNL1	Q6ZST4	164 aa		11.1	□□□□□ -0.63
NR1H3-231	ENST00000529540	C2CD3	Q4AC94	2353 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	NIPBL	Q6KC79	2804 aa	eCLIP	11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	TMEM213	A2RRL7	107 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540		F8W735	103 aa	Predicted RBP	11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	CTSG	P08311	255 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	CD28	P10747	220 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	CACNG7	P62955	275 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	ADAMTSL5	Q6ZMM2	481 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	NDUFA11	Q86Y39	141 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	AMN1	Q8IY45	258 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540	IFI27L1	Q96BM0	104 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540		S4R3C0	116 aa		11.09	□□□□□ -0.63
NR1H3-231	ENST00000529540		M0R3E3	92 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	IGHV3-23	P01764	117 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	KLHL30-AS1	Q8NEE0	82 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	AP1S3	Q96PC3	154 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	ASCL2	Q99929	193 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	CITED2	Q99967	270 aa	Predicted RBP	11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	TPPP3	Q9BW30	176 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	LOC389332	A0A1B0GUA5	103 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	IGLC6	P0CF74	106 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	LINC01559	Q495D7	138 aa		11.08	□□□□□ -0.64
NR1H3-231	ENST00000529540	NDUFA4	O00483	81 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 103 ms