RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 C11orf1Q9H5F2 150 aa12.3□□□□□ -0.44
SSRP1-204ENST00000529002 BOLA1Q9Y3E2 137 aa12.3□□□□□ -0.44
SSRP1-204ENST00000529002 NDUFB6O95139 128 aa12.29□□□□□ -0.44
SSRP1-204ENST00000529002 ODF1Q14990 250 aa12.29□□□□□ -0.44
SSRP1-204ENST00000529002 CFAP126Q5VTH2 177 aa12.29□□□□□ -0.44
SSRP1-204ENST00000529002 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
SSRP1-204ENST00000529002 IGKV2D-24A0A075B6R9 120 aa12.28□□□□□ -0.44
SSRP1-204ENST00000529002 TRBV6-4A0A1B0GX49 114 aa12.28□□□□□ -0.44
SSRP1-204ENST00000529002 IGSF23A1L1A6 192 aa12.28□□□□□ -0.44
SSRP1-204ENST00000529002 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
SSRP1-204ENST00000529002 GGTLC3B5MD39 225 aa12.27□□□□□ -0.45
SSRP1-204ENST00000529002 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
SSRP1-204ENST00000529002 Q9UF83 564 aa12.27□□□□□ -0.45
SSRP1-204ENST00000529002 RBAKDNA6NC62 111 aa12.26□□□□□ -0.45
SSRP1-204ENST00000529002 F6UZH7 168 aa12.26□□□□□ -0.45
SSRP1-204ENST00000529002 CSN1S1P47710 185 aa12.26□□□□□ -0.45
SSRP1-204ENST00000529002 ZNF876PQ49A33 203 aa12.26□□□□□ -0.45
SSRP1-204ENST00000529002 RPH3ALQ9UNE2 315 aa12.26□□□□□ -0.45
SSRP1-204ENST00000529002 GAGE12JA6NER3 117 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 DIRC3C9JPN6 131 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 GAGE1Q13065 139 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 GAGE4Q13068 117 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 GAGE5Q13069 117 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 GAGE13Q4V321 117 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 CHAC2Q8WUX2 184 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 NPCDR1Q9BY65 106 aa12.25□□□□□ -0.45
SSRP1-204ENST00000529002 FAM25EA8MYX2 175 aa12.24□□□□□ -0.45
SSRP1-204ENST00000529002 TOR2AQ5JU69 321 aa12.24□□□□□ -0.45
SSRP1-204ENST00000529002 MITD1Q8WV92 249 aa12.24□□□□□ -0.45
SSRP1-204ENST00000529002 TVP23CQ96ET8 276 aa12.24□□□□□ -0.45
SSRP1-204ENST00000529002 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
SSRP1-204ENST00000529002 S100A11P31949 105 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 SULT1A1P50225 295 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 TMEM252Q8N6L7 170 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 THAP6Q8TBB0 222 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 DEDD2Q8WXF8 326 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 HYLS1Q96M11 299 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 MRPS26Q9BYN8 205 aaKnown RBP12.23□□□□□ -0.45
SSRP1-204ENST00000529002 SDF2L1Q9HCN8 221 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
SSRP1-204ENST00000529002 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
SSRP1-204ENST00000529002 H3BMQ9 156 aa12.22□□□□□ -0.45
SSRP1-204ENST00000529002 PANO1I0J062 215 aa12.22□□□□□ -0.45
SSRP1-204ENST00000529002 EIF3GO75821 320 aaKnown RBP eCLIP12.22□□□□□ -0.45
SSRP1-204ENST00000529002 LINC00694P0DN24 101 aa12.22□□□□□ -0.45
SSRP1-204ENST00000529002 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
SSRP1-204ENST00000529002 RMI2Q96E14 147 aa12.22□□□□□ -0.45
SSRP1-204ENST00000529002 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
SSRP1-204ENST00000529002 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 OR7C2O60412 319 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 BTCP35070 178 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 TMBIM6P55061 237 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 ZNF506Q5JVG8 444 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 ASB13Q8WXK3 278 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 SAMD10Q9BYL1 202 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 LYRM2Q9NU23 88 aaPredicted RBP12.21□□□□□ -0.45
SSRP1-204ENST00000529002 C11orf21Q9P2W6 132 aa12.21□□□□□ -0.45
SSRP1-204ENST00000529002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.21□□□□□ -0.45
SSRP1-204ENST00000529002 TRAV8-1A0A0A6YYK1 113 aa12.2□□□□□ -0.46
SSRP1-204ENST00000529002 S100A10P60903 97 aa12.2□□□□□ -0.46
SSRP1-204ENST00000529002 BCL7BQ9BQE9 202 aa12.2□□□□□ -0.46
SSRP1-204ENST00000529002 MGST1P10620 155 aaKnown RBP12.19□□□□□ -0.46
SSRP1-204ENST00000529002 INPP1P49441 399 aa12.19□□□□□ -0.46
SSRP1-204ENST00000529002 SPANXN2Q5MJ10 180 aa12.19□□□□□ -0.46
SSRP1-204ENST00000529002 Q6ZRU5 148 aa12.19□□□□□ -0.46
SSRP1-204ENST00000529002 NIT1Q86X76 327 aa12.19□□□□□ -0.46
SSRP1-204ENST00000529002 TMEM75Q8N9X5 138 aa12.19□□□□□ -0.46
SSRP1-204ENST00000529002 OR2T35Q8NGX2 323 aa12.19□□□□□ -0.46
SSRP1-204ENST00000529002 ATP5SQ99766 215 aa12.19□□□□□ -0.46
SSRP1-204ENST00000529002 UBE2L3P68036 154 aaKnown RBP12.18□□□□□ -0.46
SSRP1-204ENST00000529002 STX12Q86Y82 276 aa12.18□□□□□ -0.46
SSRP1-204ENST00000529002 KCNS1Q96KK3 526 aa12.18□□□□□ -0.46
SSRP1-204ENST00000529002 SGK494Q96LW2 274 aa12.18□□□□□ -0.46
SSRP1-204ENST00000529002 C9orf85Q96MD7 179 aa12.18□□□□□ -0.46
SSRP1-204ENST00000529002 TREM1Q9NP99 234 aa12.18□□□□□ -0.46
SSRP1-204ENST00000529002 NAP1L6A6NFF2 107 aa12.17□□□□□ -0.46
SSRP1-204ENST00000529002 ZNF80P51504 273 aaPredicted RBP12.17□□□□□ -0.46
SSRP1-204ENST00000529002 HBG1P69891 147 aa12.17□□□□□ -0.46
SSRP1-204ENST00000529002 HBG2P69892 147 aa12.17□□□□□ -0.46
SSRP1-204ENST00000529002 NHLH2Q02577 135 aa12.17□□□□□ -0.46
SSRP1-204ENST00000529002 GOLT1AQ6ZVE7 132 aa12.17□□□□□ -0.46
SSRP1-204ENST00000529002 C14orf178Q8N769 122 aaPredicted RBP12.17□□□□□ -0.46
SSRP1-204ENST00000529002 CYB561D1Q8N8Q1 229 aa12.17□□□□□ -0.46
SSRP1-204ENST00000529002 TMED6Q8WW62 240 aa12.17□□□□□ -0.46
SSRP1-204ENST00000529002 CIDEAO60543 219 aa12.16□□□□□ -0.46
SSRP1-204ENST00000529002 PVALBP20472 110 aaPredicted RBP12.16□□□□□ -0.46
SSRP1-204ENST00000529002 RAB32Q13637 225 aa12.16□□□□□ -0.46
SSRP1-204ENST00000529002 ATP6V1FQ16864 119 aa12.16□□□□□ -0.46
SSRP1-204ENST00000529002 NMES1Q9C002 83 aa12.16□□□□□ -0.46
SSRP1-204ENST00000529002 JPT2Q9H910 190 aa12.16□□□□□ -0.46
SSRP1-204ENST00000529002 URGCP-MRPS24S4R325 110 aa12.16□□□□□ -0.46
SSRP1-204ENST00000529002 PGPA6NDG6 321 aa12.15□□□□□ -0.46
SSRP1-204ENST00000529002 GNG5P63218 68 aa12.15□□□□□ -0.46
SSRP1-204ENST00000529002 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
SSRP1-204ENST00000529002 PARLQ9H300 379 aa12.15□□□□□ -0.46
SSRP1-204ENST00000529002 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
SSRP1-204ENST00000529002 SEC22CQ9BRL7 303 aa12.14□□□□□ -0.47
SSRP1-204ENST00000529002 PRSS1P07477 247 aa12.13□□□□□ -0.47
SSRP1-204ENST00000529002 S100A5P33763 92 aa12.13□□□□□ -0.47
SSRP1-204ENST00000529002 IL15RAQ13261 267 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms