RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 NDFIP1Q9BT67 221 aa8.87□□□□□ -0.99
TRAF3IP2-211ENST00000528599 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
TRAF3IP2-211ENST00000528599 IL36BQ9NZH7 164 aa8.87□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 AMBPP02760 352 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 RBMY1A1P0DJD3 496 aaKnown RBP8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 RBMY1CP0DJD4 496 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HOXA5P20719 270 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 ZNF80P51504 273 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 RBMY1FQ15415 496 aaKnown RBP8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 FAM231DQ6ZW35 169 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 COX8CQ7Z4L0 72 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 TMEM183AQ8IXX5 376 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 CSNK1G2-AS1Q8NCQ2 148 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 V9GYV3 84 aa8.86□□□□□ -0.99
TRAF3IP2-211ENST00000528599 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 C7orf71A4D174 169 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 ERVFC1-1P60608 527 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 A0A1W2PPQ1 181 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 CRIP1P50238 77 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 FABP9Q0Z7S8 132 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 C1orf158Q8N1D5 194 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 FRZBQ92765 325 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 C1QTNF4Q9BXJ3 329 aa8.85□□□□□ -0.99
TRAF3IP2-211ENST00000528599 ZNF324O75467 553 aaPredicted RBP8.84□□□□□ -0.99
TRAF3IP2-211ENST00000528599 INSP01308 110 aa8.84□□□□□ -0.99
TRAF3IP2-211ENST00000528599 TRGC1P0CF51 173 aa8.84□□□□□ -0.99
TRAF3IP2-211ENST00000528599 DEFB135Q30KP9 77 aa8.84□□□□□ -0.99
TRAF3IP2-211ENST00000528599 Q6AWC8 147 aa8.84□□□□□ -0.99
TRAF3IP2-211ENST00000528599 NBEAL2Q6ZNJ1 2754 aa8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 TENM3Q9P273 2699 aa8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 S100A8P05109 93 aa8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 MGST1P10620 155 aaKnown RBP8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 RPL19P84098 196 aaKnown RBP8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 OR5I1Q13606 314 aa8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 LINC00518Q8N0U6 118 aa8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
TRAF3IP2-211ENST00000528599 COX19Q49B96 90 aa8.82□□□□□ -1
TRAF3IP2-211ENST00000528599 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
TRAF3IP2-211ENST00000528599 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
TRAF3IP2-211ENST00000528599 Q6ZWC4 215 aa8.82□□□□□ -1
TRAF3IP2-211ENST00000528599 C11orf21Q9P2W6 132 aa8.82□□□□□ -1
TRAF3IP2-211ENST00000528599 IGHV3OR16-12A0A075B7B8 117 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 SMIM27A0A1W2PRY6 76 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 SH2D1AO60880 128 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 PRM2P04554 102 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 NDUFA6P56556 154 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 PRR27Q6MZM9 219 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 ZNF705AQ6ZN79 300 aaPredicted RBP8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 RNF183Q96D59 192 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 C20orf144Q9BQM9 153 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 RETNQ9HD89 108 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 TRAV21A0A0B4J279 112 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 FABP5P3A8MUU1 101 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 AKR1D1P51857 326 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 FAM162BQ5T6X4 162 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 RCHY1Q96PM5 261 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 LINC01587Q99440 93 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 TMEM208Q9BTX3 173 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 RNASE7Q9H1E1 156 aaKnown RBP8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 GOLT1BQ9Y3E0 138 aa8.81□□□□□ -1
TRAF3IP2-211ENST00000528599 SPRY2O43597 315 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 MUC21Q5SSG8 566 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 NUDT10Q8NFP7 164 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 NUDT11Q96G61 164 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 B9D2Q9BPU9 175 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 TM2D3Q9BRN9 247 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 OVOL2Q9BRP0 275 aa8.8□□□□□ -1
TRAF3IP2-211ENST00000528599 C19orf71A6NCJ1 209 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 CT83Q5H943 113 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 RASL11AQ6T310 242 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 GNB1LQ9BYB4 327 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 NAGKQ9UJ70 344 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 TP53TG1Q9Y2A0 90 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 TRAPPC1Q9Y5R8 145 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 X6R8D5 127 aa8.79□□□□□ -1
TRAF3IP2-211ENST00000528599 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 IGKV3D-20A0A0C4DH25 116 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 ZNF705GA8MUZ8 300 aaPredicted RBP8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 GATCO43716 136 aaKnown RBP8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 HTN1P15515 57 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 ANXA2RQ3ZCQ2 193 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 OR11H2Q8NH07 326 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 TP53TG3Q9ULZ0 132 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 STAB2Q8WWQ8 2551 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 FAM231BA6NCW3 169 aa8.78□□□□□ -1
TRAF3IP2-211ENST00000528599 ORM1P02763 201 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms