RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ZNRF2Q8NHG8 242 aa9.93□□□□□ -0.82
CAPN1-212ENST00000527887 DNAH11Q96DT5 4516 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 C7orf71A4D174 169 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 KLLNB2CW77 178 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 B4DEV8 164 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 M0R3E3 92 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 EIF3GO75821 320 aaKnown RBP eCLIP9.92□□□□□ -0.82
CAPN1-212ENST00000527887 OR10J4P0C629 311 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 PYYP10082 97 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 PRB4P10163 310 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-212ENST00000527887 C9orf47Q6ZRZ4 202 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 HIST1H2BAQ96A08 127 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 FAM19A4Q96LR4 140 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 C18orf15Q96N68 181 aa9.92□□□□□ -0.82
CAPN1-212ENST00000527887 TRBV7-9A0A0J9YWB2 115 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 NBDYA0A0U1RRE5 68 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 GAGE12BA1L429 117 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 GAGE7O76087 117 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 S100A9P06702 114 aaKnown RBP9.91□□□□□ -0.82
CAPN1-212ENST00000527887 GAGE12FP0CL80 117 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 GAGE12GP0CL81 117 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 GAGE12IP0CL82 117 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 CRISP2P16562 243 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 UBE2G2P60604 165 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 SUMO1P63165 101 aaKnown RBP9.91□□□□□ -0.82
CAPN1-212ENST00000527887 OR5I1Q13606 314 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 ANXA2RQ3ZCQ2 193 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 AGPAT4-IT1Q9H0P7 198 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 OTORQ9NRC9 128 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 LY96Q9Y6Y9 160 aa9.91□□□□□ -0.82
CAPN1-212ENST00000527887 GGTLC3B5MD39 225 aa9.9□□□□□ -0.82
CAPN1-212ENST00000527887 J3KRW8 73 aa9.9□□□□□ -0.82
CAPN1-212ENST00000527887 ZNF324O75467 553 aaPredicted RBP9.9□□□□□ -0.82
CAPN1-212ENST00000527887 TMEM241Q24JQ0 296 aa9.9□□□□□ -0.82
CAPN1-212ENST00000527887 TMEM78Q5T7P6 136 aa9.9□□□□□ -0.82
CAPN1-212ENST00000527887 BLNKQ8WV28 456 aa9.9□□□□□ -0.82
CAPN1-212ENST00000527887 NAT8Q9UHE5 227 aa9.9□□□□□ -0.82
CAPN1-212ENST00000527887 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.82
CAPN1-212ENST00000527887 TRAV26-1A0A087WT03 109 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 SERTM2A0A1B0GWG4 89 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 ZNF727A8MUV8 499 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 GPX1P07203 203 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 ERCC8Q13216 396 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 RHEBQ15382 184 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 IBA57Q5T440 356 aaKnown RBP9.89□□□□□ -0.83
CAPN1-212ENST00000527887 EXOC3-AS1Q8N2X6 119 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 C6orf223Q8N319 242 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 C5orf17Q8NAS9 161 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 TVP23CQ96ET8 276 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 SMIM7Q9BQ49 75 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 PARLQ9H300 379 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 EPDR1Q9UM22 224 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 KLF12Q9Y4X4 402 aa9.89□□□□□ -0.83
CAPN1-212ENST00000527887 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
CAPN1-212ENST00000527887 FBLL1A6NHQ2 334 aaKnown RBP9.88□□□□□ -0.83
CAPN1-212ENST00000527887 C9JCJ5 164 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 BTF3P20290 206 aaKnown RBP9.88□□□□□ -0.83
CAPN1-212ENST00000527887 CSN1S1P47710 185 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 RANP62826 216 aaKnown RBP9.88□□□□□ -0.83
CAPN1-212ENST00000527887 TTC32Q5I0X7 151 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 CLRN3Q8NCR9 226 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 UPK3BQ9BT76 320 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 Q9H8V8 135 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 SDF2L1Q9HCN8 221 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 ZNF492Q9P255 531 aa9.88□□□□□ -0.83
CAPN1-212ENST00000527887 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 A0A087WWC5 75 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 TRBV6-1A0A0K0K1D8 114 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 PGPA6NDG6 321 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 HOXA5P20719 270 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 RNASE4P34096 147 aaKnown RBP9.87□□□□□ -0.83
CAPN1-212ENST00000527887 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 Q9H3A6 140 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 GSN-AS1Q9NRJ2 163 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
CAPN1-212ENST00000527887 SCO2A0A1W2PP80 73 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 A0A1W2PPQ1 181 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 PEX7O00628 323 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 SPINK4O60575 86 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 ZNF138P52744 262 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 CEBPGP53567 150 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 TCL1AP56279 114 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 SLAQ13239 276 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 BTN1A1Q13410 526 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 Q6ZTI0 123 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 ZFAND2AQ8N6M9 145 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 LENEPQ9Y5L5 61 aa9.86□□□□□ -0.83
CAPN1-212ENST00000527887 IGKV2-40A0A087WW87 121 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-212ENST00000527887 TRGV1A0A0A0MS02 117 aa9.85□□□□□ -0.83
CAPN1-212ENST00000527887 A0A0J9YY99 117 aa9.85□□□□□ -0.83
CAPN1-212ENST00000527887 K7EQM0 130 aa9.85□□□□□ -0.83
CAPN1-212ENST00000527887 IGKV2D-40P01614 121 aaPredicted RBP9.85□□□□□ -0.83
CAPN1-212ENST00000527887 CMTM2Q8TAZ6 248 aa9.85□□□□□ -0.83
CAPN1-212ENST00000527887 VGLL1Q99990 258 aa9.85□□□□□ -0.83
CAPN1-212ENST00000527887 KRTAP17-1Q9BYP8 105 aa9.85□□□□□ -0.83
CAPN1-212ENST00000527887 NACAE9PAV3 2078 aa9.85□□□□□ -0.83
CAPN1-212ENST00000527887 IGHV1OR15-1A0A075B7D0 117 aa9.84□□□□□ -0.83
CAPN1-212ENST00000527887 TCRAP04437 139 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms