RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CD7P09564 240 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 CFC1BP0CG36 223 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 CFC1P0CG37 223 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 DLX6P56179 175 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 S100A4P26447 101 aaKnown RBP9.65□□□□□ -0.86
TSKU-203ENST00000527881 TEX36Q5VZQ5 186 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 CACNA1HO95180 2353 aa9.65□□□□□ -0.86
TSKU-203ENST00000527881 Q8N1Y9 231 aa9.65□□□□□ -0.87
TSKU-203ENST00000527881 LINC00311Q8N616 119 aa9.65□□□□□ -0.87
TSKU-203ENST00000527881 TRAV2A0A0B4J234 112 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 PRSS33Q8NF86 280 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 IGFBPL1Q8WX77 278 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 BAALCQ8WXS3 180 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 TIMD4Q96H15 378 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 DKK4Q9UBT3 224 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 TCF15Q12870 199 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 RASL10AQ92737 203 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
TSKU-203ENST00000527881 Q6ZS46 218 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 NEXN-AS1Q8NBZ9 246 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 CNFNQ9BYD5 112 aa9.64□□□□□ -0.87
TSKU-203ENST00000527881 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
TSKU-203ENST00000527881 C21orf62Q9NYP8 219 aa9.63□□□□□ -0.87
TSKU-203ENST00000527881 LOXP28300 417 aaPredicted RBP9.63□□□□□ -0.87
TSKU-203ENST00000527881 OR10J6PQ8NGY7 276 aa9.63□□□□□ -0.87
TSKU-203ENST00000527881 YAE1D1Q9NRH1 226 aa9.63□□□□□ -0.87
TSKU-203ENST00000527881 A0A0J9YY99 117 aa9.63□□□□□ -0.87
TSKU-203ENST00000527881 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
TSKU-203ENST00000527881 ID1P41134 155 aa9.63□□□□□ -0.87
TSKU-203ENST00000527881 ZNF56Q15929 161 aa9.63□□□□□ -0.87
TSKU-203ENST00000527881 FAM27E3Q08E93 113 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
TSKU-203ENST00000527881 IGHV3-64A0A075B6Q5 118 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 A4D1N5 150 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 ZNF474Q6S9Z5 364 aaPredicted RBP9.62□□□□□ -0.87
TSKU-203ENST00000527881 FAM57AQ8TBR7 257 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 DYNLRB1Q9NP97 96 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 C11orf21Q9P2W6 132 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 CRYGBP07316 175 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 CHCHD5Q9BSY4 110 aa9.62□□□□□ -0.87
TSKU-203ENST00000527881 C17orf100A8MU93 164 aa9.61□□□□□ -0.87
TSKU-203ENST00000527881 CENPVL3A0A0U1RRI6 287 aa9.61□□□□□ -0.87
TSKU-203ENST00000527881 TIMM23O14925 209 aa9.61□□□□□ -0.87
TSKU-203ENST00000527881 BRI3O95415 125 aa9.61□□□□□ -0.87
TSKU-203ENST00000527881 FOXC1Q12948 553 aa9.61□□□□□ -0.87
TSKU-203ENST00000527881 H3BMM0 161 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 TMEM178BH3BS89 294 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 DUSP14O95147 198 aaKnown RBP9.6□□□□□ -0.87
TSKU-203ENST00000527881 ATXN8Q156A1 80 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 TNFRSF18Q9Y5U5 241 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 GVINP1Q7Z2Y8 2422 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 BUB1B-PAK6H3BSN5 160 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 IGHG3P01860 377 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 SBSPONQ8IVN8 264 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 SLC50A1Q9BRV3 221 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
TSKU-203ENST00000527881 ABCA4P78363 2273 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 A0A1W2PNU3 283 aaPredicted RBP9.59□□□□□ -0.87
TSKU-203ENST00000527881 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 FDCSPQ8NFU4 85 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 AGPAT4-IT1Q9H0P7 198 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 PHLDA3Q9Y5J5 127 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 IGHV3-30P01768 117 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 PRSS2P07478 247 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 IGHV3-30-5P0DP03 117 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 ARHGAP32A7KAX9 2087 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 ZFHX4Q86UP3 3567 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 SMAD5-AS1Q9Y6J3 95 aa9.59□□□□□ -0.87
TSKU-203ENST00000527881 KALRNO60229 2985 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 ASCL5Q7RTU5 278 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 MED13LQ71F56 2210 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 C22orf34Q6ZV56 151 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 C8orf31Q8N9H6 132 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 TP53TG1Q9Y2A0 90 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 IGHG4P01861 327 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 COX6B1P14854 86 aa9.58□□□□□ -0.88
TSKU-203ENST00000527881 NBR2O15453 112 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 SRSF2Q01130 221 aaKnown RBP9.57□□□□□ -0.88
TSKU-203ENST00000527881 VPREB3Q9UKI3 123 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 J3QQQ9 107 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 M0QXV9 152 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 SLC25A29Q8N8R3 303 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 TRAV17A0A0B4J275 112 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 F5H697 171 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 PAPPA-AS1Q5QFB9 102 aa9.57□□□□□ -0.88
TSKU-203ENST00000527881 IGHV7-4-1A0A0J9YVY3 117 aa9.56□□□□□ -0.88
TSKU-203ENST00000527881 IGHV3-33P01772 117 aa9.56□□□□□ -0.88
TSKU-203ENST00000527881 TSPEAR-AS2P59090 65 aa9.56□□□□□ -0.88
TSKU-203ENST00000527881 DUX3Q96PT4 197 aa9.56□□□□□ -0.88
TSKU-203ENST00000527881 ADIPOQQ15848 244 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 448.5 ms