RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 ORM2P19652 201 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 CNN1P51911 297 aaKnown RBP6.96□□□□□ -1.3
CAPN1-210ENST00000527699 RPL23P62829 140 aaKnown RBP6.96□□□□□ -1.3
CAPN1-210ENST00000527699 RPP30P78346 268 aaKnown RBP6.96□□□□□ -1.3
CAPN1-210ENST00000527699 Q5VSD8 79 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 GFI1BQ5VTD9 330 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 C17orf77Q96MU5 243 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 UHRF2Q96PU4 802 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 PARLQ9H300 379 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 PRO1933Q9H354 126 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 HSPB7Q9UBY9 170 aa6.96□□□□□ -1.3
CAPN1-210ENST00000527699 TEX48A0A1B0GUV7 120 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 H3BP45 60 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 ISLRO14498 428 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 ZNF726P1Q15940 193 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 SPANXN5Q5MJ07 72 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 AMTNQ6UX39 209 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 TMEM14EPQ6UXP3 125 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 OR10P1Q8NGE3 313 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 OR10G9Q8NGN4 311 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 OR10G7Q8NGN6 311 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 OR1B1Q8NGR6 318 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 IGF2BP2-AS1Q96M15 143 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 NACAE9PAV3 2078 aa6.95□□□□□ -1.3
CAPN1-210ENST00000527699 TRAV8-2A0A0B4J237 113 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 NBDYA0A0U1RRE5 68 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 A0A1W2PPQ1 181 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 CRXO43186 299 aaPredicted RBP6.94□□□□□ -1.3
CAPN1-210ENST00000527699 MPDU1O75352 247 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 INSP01308 110 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 FUSP35637 526 aaKnown RBP eCLIP6.94□□□□□ -1.3
CAPN1-210ENST00000527699 FGF8P55075 233 aaPredicted RBP6.94□□□□□ -1.3
CAPN1-210ENST00000527699 ERVFC1-1P60608 527 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 RHOBP62745 196 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 HIST1H1AQ02539 215 aaPredicted RBP6.94□□□□□ -1.3
CAPN1-210ENST00000527699 COX19Q49B96 90 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 CDPF1Q6NVV7 123 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 C6orf223Q8N319 242 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 ZNF738Q8NE65 137 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 RPUSD4Q96CM3 377 aaKnown RBP6.94□□□□□ -1.3
CAPN1-210ENST00000527699 LINC01587Q99440 93 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 TRGV9Q99603 122 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 LINC00588Q9Y4M8 146 aa6.94□□□□□ -1.3
CAPN1-210ENST00000527699 CDC34P49427 236 aaPredicted RBP6.93□□□□□ -1.3
CAPN1-210ENST00000527699 VWC2Q2TAL6 325 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 FFAR4Q5NUL3 377 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 C1orf194Q5T5A4 169 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 SPATA12Q7Z6I5 190 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 C15orf53Q8NAA6 179 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 ZNRF2Q8NHG8 242 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 FUT9Q9Y231 359 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
CAPN1-210ENST00000527699 A0A0J9YY99 117 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 J3KRW8 73 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 OR5I1Q13606 314 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 SPATA31B1PQ5VZV4 182 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 THAP8Q8NA92 274 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 CLUHP3Q96NS8 147 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 NOP10Q9NPE3 64 aaKnown RBP6.92□□□□□ -1.3
CAPN1-210ENST00000527699 NAGKQ9UJ70 344 aa6.92□□□□□ -1.3
CAPN1-210ENST00000527699 A0A1W2PPV4 95 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 PLAC8L1A1L4L8 177 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 H3BTX0 84 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 DUSP14O95147 198 aaKnown RBP6.91□□□□□ -1.3
CAPN1-210ENST00000527699 SCGB1D1O95968 90 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 ATP5G1P05496 136 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 OR5G3P0C626 314 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 ATP5G3P48201 142 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 GAGE1Q13065 139 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 KIR3DS1Q14943 382 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 SSX7Q7RTT5 188 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 CMTM2Q8TAZ6 248 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 NPCDR1Q9BY65 106 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 PXMP4Q9Y6I8 212 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 LY96Q9Y6Y9 160 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 ARL2-SNX15V9GYD0 113 aa6.91□□□□□ -1.3
CAPN1-210ENST00000527699 LYRM9A8MSI8 78 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 PAGE4O60829 102 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 MT-ND6P03923 174 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 LINC00614P0C842 121 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 ESDP10768 282 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 CCL18P55774 89 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 KRTAP10-2P60368 255 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 ARL16Q0P5N6 197 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 TMEM144Q7Z5S9 345 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 LINC01551Q86U37 167 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 TMEM37Q8WXS4 190 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 C20orf144Q9BQM9 153 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 KRTAP1-5Q9BYS1 174 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 MDFICQ9P1T7 246 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 CBY1Q9Y3M2 126 aa6.9□□□□□ -1.3
CAPN1-210ENST00000527699 RNF213Q63HN8 5207 aa6.9□□□□□ -1.31
CAPN1-210ENST00000527699 GAGE12BA1L429 117 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 CBY3A6NI87 242 aa6.89□□□□□ -1.31
CAPN1-210ENST00000527699 A8MTW9 85 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms