RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 XKRY2A2RUG3 117 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 M0R3E3 92 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 CCL24O00175 119 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 CHEK1O14757 476 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 IGHV3-11P01762 117 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 HLA-DQA1P01909 254 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 LGALS1P09382 135 aaKnown RBP4.36□□□□□ -1.71
LINC01001-202ENST00000527683 FABP9Q0Z7S8 132 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 COA6Q5JTJ3 125 aaKnown RBP4.36□□□□□ -1.71
LINC01001-202ENST00000527683 FRZBQ92765 325 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 UBE2E2Q96LR5 201 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 DUX3Q96PT4 197 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 PRR25Q96S07 402 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 GNB1LQ9BYB4 327 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 KLK15Q9H2R5 256 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 UFC1Q9Y3C8 167 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 TRAPPC1Q9Y5R8 145 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 DNAH3Q8TD57 4116 aa4.36□□□□□ -1.71
LINC01001-202ENST00000527683 TRGV11A0A075B6L2 103 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 TRAV8-1A0A0A6YYK1 113 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 IGHV7-4-1A0A0J9YVY3 117 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 LCE6AA0A183 80 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 A0A1B0GW15 77 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 A8MWP6 167 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 SNURFLB1AK76 121 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 LGALS9O00182 355 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 TRBV12-3P01733 135 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 SMIM6P0DI80 62 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 CDX1P47902 265 aaPredicted RBP4.35□□□□□ -1.71
LINC01001-202ENST00000527683 NDUFA6P56556 154 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 RPS20P60866 119 aaKnown RBP4.35□□□□□ -1.71
LINC01001-202ENST00000527683 LCN12Q6JVE5 192 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 UNQ9165/PRO28630Q6UXU0 137 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 RBPMS2Q6ZRY4 209 aaKnown RBP4.35□□□□□ -1.71
LINC01001-202ENST00000527683 SBSPONQ8IVN8 264 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 ZC2HC1AQ96GY0 325 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 SGK494Q96LW2 274 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 NRN1Q9NPD7 142 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 PPP1R14DQ9NXH3 145 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 LENEPQ9Y5L5 61 aa4.35□□□□□ -1.71
LINC01001-202ENST00000527683 IGKV2-40A0A087WW87 121 aaPredicted RBP4.34□□□□□ -1.71
LINC01001-202ENST00000527683 OVOL1O14753 267 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
LINC01001-202ENST00000527683 IGKV2D-40P01614 121 aaPredicted RBP4.34□□□□□ -1.71
LINC01001-202ENST00000527683 APOHP02749 345 aaPredicted RBP4.34□□□□□ -1.71
LINC01001-202ENST00000527683 S100A2P29034 98 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 FOXA3P55318 350 aaPredicted RBP4.34□□□□□ -1.71
LINC01001-202ENST00000527683 TCL1AP56279 114 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 HBBP68871 147 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 FAM162BQ5T6X4 162 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 TMEM78Q5T7P6 136 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 TMEM136Q6ZRR5 245 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 C9orf47Q6ZRZ4 202 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 KLHL30-AS1Q8NEE0 82 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 NUP35Q8NFH5 326 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 OR2D3Q8NGH3 330 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 BORCS7Q96B45 105 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 SMPXQ9UHP9 88 aa4.34□□□□□ -1.71
LINC01001-202ENST00000527683 IGHV3OR16-13A0A075B7E8 117 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 IGHV3-49A0A0A0MS15 119 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 IGHV3-74A0A0B4J1X5 117 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 TRAV8-2A0A0B4J237 113 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 IGHV3-66A0A0C4DH42 116 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 TRBV7-9A0A0J9YWB2 115 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 A0A1B0GXF2 115 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 SOCS3O14543 225 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 CA1P00915 261 aaPredicted RBP4.33□□□□□ -1.72
LINC01001-202ENST00000527683 CRISP2P16562 243 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 CBLN1P23435 193 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 ID1P41134 155 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 ZNF138P52744 262 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 DEFB136Q30KP8 78 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 OR10J3Q5JRS4 329 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 C9orf66Q5T8R8 295 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 MRPL54Q6P161 138 aaKnown RBP4.33□□□□□ -1.72
LINC01001-202ENST00000527683 LINC00322Q6ZN03 302 aaPredicted RBP4.33□□□□□ -1.72
LINC01001-202ENST00000527683 HIST3H2BBQ8N257 126 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 ZNF738Q8NE65 137 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 OR10J6PQ8NGY7 276 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 C4orf3Q8WVX3 66 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 RCHY1Q96PM5 261 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 RHPN1-AS1Q9BWJ2 59 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 ZNF256Q9Y2P7 627 aaPredicted RBP4.33□□□□□ -1.72
LINC01001-202ENST00000527683 CBY1Q9Y3M2 126 aa4.33□□□□□ -1.72
LINC01001-202ENST00000527683 A0A1B0GUT8 65 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 TMEM189A5PLL7 270 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 FABP5P3A8MUU1 101 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 LINC00587B1AMM8 73 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 SH2D1AO60880 128 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 APCSP02743 223 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 HLA-DMBP28068 263 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 RAB4BP61018 213 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 HIST1H1AQ02539 215 aaPredicted RBP4.32□□□□□ -1.72
LINC01001-202ENST00000527683 Q0VG73 95 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 RIGQ13278 110 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 TCF24Q7RTU0 167 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 RNF182Q8N6D2 247 aa4.32□□□□□ -1.72
LINC01001-202ENST00000527683 Q8TAT8 98 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms