RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 TDRG1Q3Y452 100 aa15.19■□□□□ 0.02
TRAPPC4-208ENST00000527680 A0A087WTM6 91 aa15.18■□□□□ 0.02
TRAPPC4-208ENST00000527680 PQLC2Q6ZP29 291 aa15.18■□□□□ 0.02
TRAPPC4-208ENST00000527680 NHLRC2Q8NBF2 726 aa15.18■□□□□ 0.02
TRAPPC4-208ENST00000527680 IGHV3-16A0A0C4DH30 117 aa15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 F6UZH7 168 aa15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 HMGB3O15347 200 aaKnown RBP15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 CRYGDP07320 174 aa15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 DEFA1P59665 94 aa15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 DEFA3P59666 94 aa15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 WFDC1Q9HC57 220 aa15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 SDF2L1Q9HCN8 221 aa15.17■□□□□ 0.02
TRAPPC4-208ENST00000527680 TRAV8-1A0A0A6YYK1 113 aa15.16■□□□□ 0.02
TRAPPC4-208ENST00000527680 SH2D6Q7Z4S9 175 aa15.16■□□□□ 0.02
TRAPPC4-208ENST00000527680 OR10G9Q8NGN4 311 aa15.16■□□□□ 0.02
TRAPPC4-208ENST00000527680 OR10G7Q8NGN6 311 aa15.16■□□□□ 0.02
TRAPPC4-208ENST00000527680 KCNS1Q96KK3 526 aa15.16■□□□□ 0.02
TRAPPC4-208ENST00000527680 LOC100131303A0A0U1RQF7 123 aa15.15■□□□□ 0.02
TRAPPC4-208ENST00000527680 TYMSP04818 313 aa15.15■□□□□ 0.02
TRAPPC4-208ENST00000527680 RAB2AP61019 212 aa15.15■□□□□ 0.02
TRAPPC4-208ENST00000527680 GNG5P63218 68 aa15.15■□□□□ 0.02
TRAPPC4-208ENST00000527680 C10orf126Q8N4M7 172 aa15.15■□□□□ 0.02
TRAPPC4-208ENST00000527680 SGK494Q96LW2 274 aa15.15■□□□□ 0.02
TRAPPC4-208ENST00000527680 PPT1P50897 306 aa15.14■□□□□ 0.01
TRAPPC4-208ENST00000527680 ARL6IP6Q8N6S5 226 aa15.14■□□□□ 0.01
TRAPPC4-208ENST00000527680 ASB13Q8WXK3 278 aa15.14■□□□□ 0.01
TRAPPC4-208ENST00000527680 TVP23CQ96ET8 276 aa15.14■□□□□ 0.01
TRAPPC4-208ENST00000527680 NDFIP1Q9BT67 221 aa15.14■□□□□ 0.01
TRAPPC4-208ENST00000527680 PSCAO43653 123 aa15.13■□□□□ 0.01
TRAPPC4-208ENST00000527680 XGP55808 180 aa15.12■□□□□ 0.01
TRAPPC4-208ENST00000527680 IGHV3-38A0A0C4DH36 116 aa15.11■□□□□ 0.01
TRAPPC4-208ENST00000527680 FBLL1A6NHQ2 334 aaKnown RBP15.11■□□□□ 0.01
TRAPPC4-208ENST00000527680 GATA1P15976 413 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC4-208ENST00000527680 KRTAP10-1P60331 282 aa15.11■□□□□ 0.01
TRAPPC4-208ENST00000527680 ZNF876PQ49A33 203 aa15.11■□□□□ 0.01
TRAPPC4-208ENST00000527680 TRAV8-6A0A0B4J262 113 aa15.1■□□□□ 0.01
TRAPPC4-208ENST00000527680 K7EQM0 130 aa15.1■□□□□ 0.01
TRAPPC4-208ENST00000527680 PFN1P07737 140 aaKnown RBP15.1■□□□□ 0.01
TRAPPC4-208ENST00000527680 ARL14EPLP0DKL9 152 aa15.1■□□□□ 0.01
TRAPPC4-208ENST00000527680 GCSHP23434 173 aa15.1■□□□□ 0.01
TRAPPC4-208ENST00000527680 CDC34P49427 236 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC4-208ENST00000527680 PRADC1Q9BSG0 188 aa15.1■□□□□ 0.01
TRAPPC4-208ENST00000527680 INAFM2P0DMQ5 153 aa15.09■□□□□ 0.01
TRAPPC4-208ENST00000527680 OR10J3Q5JRS4 329 aa15.09■□□□□ 0.01
TRAPPC4-208ENST00000527680 FRZBQ92765 325 aa15.09■□□□□ 0.01
TRAPPC4-208ENST00000527680 IGHV3-73A0A0B4J1V6 119 aa15.08■□□□□ 0
TRAPPC4-208ENST00000527680 SERTM2A0A1B0GWG4 89 aa15.08■□□□□ 0
TRAPPC4-208ENST00000527680 TAAR5O14804 337 aa15.08■□□□□ 0
TRAPPC4-208ENST00000527680 SLC25A29Q8N8R3 303 aa15.08■□□□□ 0
TRAPPC4-208ENST00000527680 HSD17B11Q8NBQ5 300 aa15.08■□□□□ 0
TRAPPC4-208ENST00000527680 A6NHS1 94 aa15.07■□□□□ 0
TRAPPC4-208ENST00000527680 TIRAPP58753 221 aa15.07■□□□□ 0
TRAPPC4-208ENST00000527680 C5orf17Q8NAS9 161 aa15.07■□□□□ 0
TRAPPC4-208ENST00000527680 PSG8Q9UQ74 426 aa15.07■□□□□ 0
TRAPPC4-208ENST00000527680 CIDEAO60543 219 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 GCGP01275 180 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 TCRAP04437 139 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 STAG3L2P0CL84 134 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 STAG3L3P0CL85 134 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 ZNF80P51504 273 aaPredicted RBP15.06■□□□□ 0
TRAPPC4-208ENST00000527680 SUMO1P63165 101 aaKnown RBP15.06■□□□□ 0
TRAPPC4-208ENST00000527680 ZFP69Q49AA0 526 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 CFAP126Q5VTH2 177 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 RAB24Q969Q5 203 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 Q9HAA7 133 aa15.06■□□□□ 0
TRAPPC4-208ENST00000527680 RS1O15537 224 aa15.05■□□□□ -0
TRAPPC4-208ENST00000527680 GCHFRP30047 84 aa15.05■□□□□ -0
TRAPPC4-208ENST00000527680 RHOHQ15669 191 aa15.05■□□□□ -0
TRAPPC4-208ENST00000527680 LINC01556Q5JQF7 62 aa15.05■□□□□ -0
TRAPPC4-208ENST00000527680 Q5VSD8 79 aa15.05■□□□□ -0
TRAPPC4-208ENST00000527680 PRNTQ86SH4 94 aa15.05■□□□□ -0
TRAPPC4-208ENST00000527680 BOLA1Q9Y3E2 137 aa15.05■□□□□ -0
TRAPPC4-208ENST00000527680 IGLV5-52A0A0A0MRZ9 124 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 TRBV6-4A0A1B0GX49 114 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 IGHV3-30P01768 117 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 IGHV3-33P01772 117 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 SMR3BP02814 79 aaPredicted RBP15.04■□□□□ -0
TRAPPC4-208ENST00000527680 IGHV3-30-3P0DP02 117 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 IGHV3-30-5P0DP03 117 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 SMUG1Q53HV7 270 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 DPPA3Q6W0C5 159 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 C11orf21Q9P2W6 132 aa15.04■□□□□ -0
TRAPPC4-208ENST00000527680 IBA57-AS1B1ANH7 110 aa15.03■□□□□ -0
TRAPPC4-208ENST00000527680 MBP02144 154 aa15.03■□□□□ -0
TRAPPC4-208ENST00000527680 FLI1Q01543 452 aaPredicted RBP15.03■□□□□ -0
TRAPPC4-208ENST00000527680 TMEM75Q8N9X5 138 aa15.03■□□□□ -0
TRAPPC4-208ENST00000527680 OR2G3Q8NGZ4 309 aa15.03■□□□□ -0
TRAPPC4-208ENST00000527680 EPDR1Q9UM22 224 aa15.03■□□□□ -0
TRAPPC4-208ENST00000527680 ALG5Q9Y673 324 aa15.03■□□□□ -0
TRAPPC4-208ENST00000527680 PGPEP1LA6NFU8 196 aa15.02■□□□□ -0
TRAPPC4-208ENST00000527680 ATP6V0CP27449 155 aa15.02■□□□□ -0
TRAPPC4-208ENST00000527680 ATP6V0E2Q8NHE4 81 aa15.02■□□□□ -0
TRAPPC4-208ENST00000527680 PSMG3Q9BT73 122 aaPredicted RBP15.02■□□□□ -0
TRAPPC4-208ENST00000527680 TMEM167BQ9NRX6 74 aa15.02■□□□□ -0
TRAPPC4-208ENST00000527680 CXorf1O96002 111 aa15.01□□□□□ -0.01
TRAPPC4-208ENST00000527680 SERF2P84101 59 aa15.01□□□□□ -0.01
TRAPPC4-208ENST00000527680 ZNF506Q5JVG8 444 aa15.01□□□□□ -0.01
TRAPPC4-208ENST00000527680 LELP1Q5T871 98 aa15.01□□□□□ -0.01
TRAPPC4-208ENST00000527680 C9orf85Q96MD7 179 aa15.01□□□□□ -0.01
TRAPPC4-208ENST00000527680 ACTR3CQ9C0K3 210 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms