RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 NDFIP1Q9BT67 221 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 SDF2L1Q9HCN8 221 aa9.33□□□□□ -0.92
SSSCA1-204ENST00000527413 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 RNF222A6NCQ9 220 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 M0R2P5 195 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 GNRH2O43555 120 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 TCRAP04437 139 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 LINC00315P59091 139 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 KCNS1Q96KK3 526 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 TNFSF18Q9UNG2 199 aa9.32□□□□□ -0.92
SSSCA1-204ENST00000527413 FXYD6-FXYD2A0A087WZ82 144 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 GGTLC3B5MD39 225 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 K7EQD1 137 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 K7EQM0 130 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 CXorf1O96002 111 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 SRIP30626 198 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 RPL7L1Q6DKI1 246 aaKnown RBP9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 INO80EQ8NBZ0 244 aaPredicted RBP9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 PCNPQ8WW12 178 aaKnown RBP9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 ACTR3CQ9C0K3 210 aaPredicted RBP9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 TMEM167BQ9NRX6 74 aa9.31□□□□□ -0.92
SSSCA1-204ENST00000527413 BORCS7-ASMTA0A0B4J1R7 106 aa9.3□□□□□ -0.92
SSSCA1-204ENST00000527413 ORM1P02763 201 aa9.3□□□□□ -0.92
SSSCA1-204ENST00000527413 GYPEP15421 78 aa9.3□□□□□ -0.92
SSSCA1-204ENST00000527413 SPATA12Q7Z6I5 190 aa9.3□□□□□ -0.92
SSSCA1-204ENST00000527413 OR4C5Q8NGB2 326 aa9.3□□□□□ -0.92
SSSCA1-204ENST00000527413 PSG8Q9UQ74 426 aa9.3□□□□□ -0.92
SSSCA1-204ENST00000527413 HSPG2P98160 4391 aa9.3□□□□□ -0.92
SSSCA1-204ENST00000527413 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 C9JCJ5 164 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 GCGP01275 180 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 IGLV2-11P01706 119 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 ZNF80P51504 273 aaPredicted RBP9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 SUMO1P63165 101 aaKnown RBP9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 FLI1Q01543 452 aaPredicted RBP9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 Q6ZRN7 208 aaPredicted RBP9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 CYB561D1Q8N8Q1 229 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 TMEM75Q8N9X5 138 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 OR2T35Q8NGX2 323 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 C11orf21Q9P2W6 132 aa9.29□□□□□ -0.92
SSSCA1-204ENST00000527413 CDK2AP2O75956 126 aa9.28□□□□□ -0.92
SSSCA1-204ENST00000527413 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
SSSCA1-204ENST00000527413 ZFP69Q49AA0 526 aa9.28□□□□□ -0.92
SSSCA1-204ENST00000527413 PRNTQ86SH4 94 aa9.28□□□□□ -0.92
SSSCA1-204ENST00000527413 WFDC10BQ8IUB3 73 aa9.28□□□□□ -0.92
SSSCA1-204ENST00000527413 TXNDC17Q9BRA2 123 aa9.28□□□□□ -0.92
SSSCA1-204ENST00000527413 EPDR1Q9UM22 224 aa9.28□□□□□ -0.92
SSSCA1-204ENST00000527413 LOC100131303A0A0U1RQF7 123 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 CTXND1A0A1B0GTU2 59 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 A0A1W2PRE2 83 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 G3V3Q6 166 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 TAAR5O14804 337 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 PFN1P07737 140 aaKnown RBP9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 KRTAP10-2P60368 255 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 SMUG1Q53HV7 270 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 LY96Q9Y6Y9 160 aa9.27□□□□□ -0.93
SSSCA1-204ENST00000527413 GATA1P15976 413 aaPredicted RBP9.26□□□□□ -0.93
SSSCA1-204ENST00000527413 RGS21Q2M5E4 152 aa9.26□□□□□ -0.93
SSSCA1-204ENST00000527413 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
SSSCA1-204ENST00000527413 C9orf85Q96MD7 179 aa9.26□□□□□ -0.93
SSSCA1-204ENST00000527413 UBE2G2P60604 165 aa9.25□□□□□ -0.93
SSSCA1-204ENST00000527413 SAPCD1Q5SSQ6 148 aa9.25□□□□□ -0.93
SSSCA1-204ENST00000527413 AKR1C8PQ5T2L2 129 aa9.25□□□□□ -0.93
SSSCA1-204ENST00000527413 ABCA13Q86UQ4 5058 aa9.25□□□□□ -0.93
SSSCA1-204ENST00000527413 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 ARPC5O15511 151 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 RS1O15537 224 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 IFNA7P01567 189 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 DNAH10OSP0CZ25 163 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 RNASE3P12724 160 aaKnown RBP9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 FGF8P55075 233 aaPredicted RBP9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 ERVFC1-1P60608 527 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 CFAP126Q5VTH2 177 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 DPPA3Q6W0C5 159 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 SH2D6Q7Z4S9 175 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 NFE4Q86UQ8 179 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 NHLRC2Q8NBF2 726 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 LINC00479Q96M42 142 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 ARL2-SNX15V9GYD0 113 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 DNAH5Q8TE73 4624 aa9.24□□□□□ -0.93
SSSCA1-204ENST00000527413 TRAV34A0A0B4J273 112 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 PGPEP1LA6NFU8 196 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 K7EP13 123 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 PEX7O00628 323 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 CIDEAO60543 219 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 EVI2AP22794 236 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 PPT1P50897 306 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 ZNF506Q5JVG8 444 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 Q86TA4 180 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 SLC25A29Q8N8R3 303 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 PTH2Q96A98 100 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 KRTAP4-5Q9BYR2 181 aa9.23□□□□□ -0.93
SSSCA1-204ENST00000527413 MAP1LC3B2A6NCE7 125 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 FAM74A7A6NL05 159 aa9.22□□□□□ -0.93
SSSCA1-204ENST00000527413 TIRAPP58753 221 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms