RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 Q9H3A6 140 aa9.3□□□□□ -0.92
CAPN1-207ENST00000527189 TMPRSS5Q9H3S3 457 aa9.3□□□□□ -0.92
CAPN1-207ENST00000527189 SMDT1Q9H4I9 107 aa9.3□□□□□ -0.92
CAPN1-207ENST00000527189 A0A1W2PPQ1 181 aa9.29□□□□□ -0.92
CAPN1-207ENST00000527189 PPT1P50897 306 aa9.29□□□□□ -0.92
CAPN1-207ENST00000527189 UBE2L3P68036 154 aaKnown RBP9.29□□□□□ -0.92
CAPN1-207ENST00000527189 ESRGQ1W209 222 aa9.29□□□□□ -0.92
CAPN1-207ENST00000527189 TTC32Q5I0X7 151 aa9.29□□□□□ -0.92
CAPN1-207ENST00000527189 ACTR3CQ9C0K3 210 aaPredicted RBP9.29□□□□□ -0.92
CAPN1-207ENST00000527189 KLF12Q9Y4X4 402 aa9.29□□□□□ -0.92
CAPN1-207ENST00000527189 A0A1W2PPV4 95 aa9.28□□□□□ -0.92
CAPN1-207ENST00000527189 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
CAPN1-207ENST00000527189 PRR9Q5T870 116 aa9.28□□□□□ -0.92
CAPN1-207ENST00000527189 PQLC2Q6ZP29 291 aa9.28□□□□□ -0.92
CAPN1-207ENST00000527189 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
CAPN1-207ENST00000527189 OTORQ9NRC9 128 aa9.28□□□□□ -0.92
CAPN1-207ENST00000527189 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
CAPN1-207ENST00000527189 CTXND1A0A1B0GTU2 59 aa9.27□□□□□ -0.93
CAPN1-207ENST00000527189 F8W036 122 aa9.27□□□□□ -0.93
CAPN1-207ENST00000527189 Q6AWC8 147 aa9.27□□□□□ -0.93
CAPN1-207ENST00000527189 SFT2D1Q8WV19 159 aa9.27□□□□□ -0.93
CAPN1-207ENST00000527189 TP53TG3Q9ULZ0 132 aa9.27□□□□□ -0.93
CAPN1-207ENST00000527189 A0A096LPF7 62 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 MAP1LC3B2A6NCE7 125 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 PGPA6NDG6 321 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 CDC34P49427 236 aaPredicted RBP9.26□□□□□ -0.93
CAPN1-207ENST00000527189 TNP2Q05952 138 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 ZNF415Q09FC8 603 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 SVBPQ8N300 66 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 OR10G4Q8NGN3 311 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 Q8TAT8 98 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 CMTM2Q8TAZ6 248 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 MAP1LC3BQ9GZQ8 125 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
CAPN1-207ENST00000527189 PAX4O43316 350 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 Q6ZQT7 251 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 IQCF2Q8IXL9 164 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 LYPD6BQ8NI32 183 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 SPXQ9BT56 116 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 MANBALQ9NQG1 85 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 HHLA3Q9XRX5 114 aa9.25□□□□□ -0.93
CAPN1-207ENST00000527189 TRAV1-1A0A0B4J248 108 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 TMEM218A2RU14 115 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 SNAPINO95295 136 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 APOC3P02656 99 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 RASL10AQ92737 203 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 SEC11CQ9BY50 192 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 ICOSQ9Y6W8 199 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 UBR4Q5T4S7 5183 aa9.24□□□□□ -0.93
CAPN1-207ENST00000527189 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 A0A1B0GV50 99 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 SERTM2A0A1B0GWG4 89 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 RBFOX3A6NFN3 312 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 CRYBA4P53673 196 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 FHL2Q14192 279 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 MRPL23Q16540 153 aaKnown RBP9.23□□□□□ -0.93
CAPN1-207ENST00000527189 MBD3L1Q8WWY6 194 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
CAPN1-207ENST00000527189 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
CAPN1-207ENST00000527189 SFTA3P0C7M3 94 aa9.22□□□□□ -0.93
CAPN1-207ENST00000527189 FHITP49789 147 aa9.22□□□□□ -0.93
CAPN1-207ENST00000527189 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
CAPN1-207ENST00000527189 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
CAPN1-207ENST00000527189 TRAV21A0A0B4J279 112 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 SIVA1O15304 175 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 CXorf1O96002 111 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 IGHV3-53P01767 116 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 STAG3L2P0CL84 134 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 STAG3L3P0CL85 134 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 TMEM183BQ1AE95 376 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 GOLT1AQ6ZVE7 132 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 TMEM183AQ8IXX5 376 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 SUN5Q8TC36 379 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 KCNS1Q96KK3 526 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 TXNDC17Q9BRA2 123 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 KRTAP1-5Q9BYS1 174 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 GNG13Q9P2W3 67 aa9.21□□□□□ -0.94
CAPN1-207ENST00000527189 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.94
CAPN1-207ENST00000527189 LRP1BQ9NZR2 4599 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 TRGV4A0A0C4DH28 118 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 BCL2P10415 239 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 ZNF506Q5JVG8 444 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 NEGR1Q7Z3B1 354 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 VAX2Q9UIW0 290 aa9.2□□□□□ -0.94
CAPN1-207ENST00000527189 CARHSP1Q9Y2V2 147 aaKnown RBP9.2□□□□□ -0.94
CAPN1-207ENST00000527189 K7EP13 123 aa9.19□□□□□ -0.94
CAPN1-207ENST00000527189 K7EQM0 130 aa9.19□□□□□ -0.94
CAPN1-207ENST00000527189 M0R2P5 195 aa9.19□□□□□ -0.94
CAPN1-207ENST00000527189 HMGB3O15347 200 aaKnown RBP9.19□□□□□ -0.94
CAPN1-207ENST00000527189 NDUFS6O75380 124 aaKnown RBP9.19□□□□□ -0.94
CAPN1-207ENST00000527189 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
CAPN1-207ENST00000527189 CDK2AP2O75956 126 aa9.19□□□□□ -0.94
CAPN1-207ENST00000527189 ORM1P02763 201 aa9.19□□□□□ -0.94
CAPN1-207ENST00000527189 ARL14EPLP0DKL9 152 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms