RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ZNF479Q96JC4 524 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 TMEM70Q9BUB7 260 aa10.85□□□□□ -0.67
PTPRU-210ENST00000527027 IGLV5-52A0A0A0MRZ9 124 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 C17orf112F2Z3M2 114 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 CRYGDP07320 174 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 HAMPP81172 84 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 OR11H4Q8NGC9 324 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 RASL10AQ92737 203 aa10.84□□□□□ -0.67
PTPRU-210ENST00000527027 GCSAMLQ5JQS6 135 aa10.83□□□□□ -0.68
PTPRU-210ENST00000527027 MUC21Q5SSG8 566 aa10.83□□□□□ -0.68
PTPRU-210ENST00000527027 NTN5Q8WTR8 489 aaPredicted RBP10.83□□□□□ -0.68
PTPRU-210ENST00000527027 FAM167A-AS1Q96KT0 104 aa10.83□□□□□ -0.68
PTPRU-210ENST00000527027 TXNDC17Q9BRA2 123 aa10.83□□□□□ -0.68
PTPRU-210ENST00000527027 SPXQ9BT56 116 aa10.83□□□□□ -0.68
PTPRU-210ENST00000527027 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
PTPRU-210ENST00000527027 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
PTPRU-210ENST00000527027 J3QL48 77 aa10.82□□□□□ -0.68
PTPRU-210ENST00000527027 PSCAO43653 123 aa10.82□□□□□ -0.68
PTPRU-210ENST00000527027 Q8TAT8 98 aa10.82□□□□□ -0.68
PTPRU-210ENST00000527027 SMIM3Q9BZL3 60 aa10.82□□□□□ -0.68
PTPRU-210ENST00000527027 WDR61Q9GZS3 305 aaKnown RBP10.82□□□□□ -0.68
PTPRU-210ENST00000527027 C9JCJ5 164 aa10.81□□□□□ -0.68
PTPRU-210ENST00000527027 BCL2L11O43521 198 aa10.81□□□□□ -0.68
PTPRU-210ENST00000527027 TMUB2Q71RG4 321 aa10.81□□□□□ -0.68
PTPRU-210ENST00000527027 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
PTPRU-210ENST00000527027 OR51M1Q9H341 326 aa10.81□□□□□ -0.68
PTPRU-210ENST00000527027 TMEM183BQ1AE95 376 aa10.8□□□□□ -0.68
PTPRU-210ENST00000527027 MIR17HGQ75NE6 70 aa10.8□□□□□ -0.68
PTPRU-210ENST00000527027 SH2D6Q7Z4S9 175 aa10.8□□□□□ -0.68
PTPRU-210ENST00000527027 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
PTPRU-210ENST00000527027 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
PTPRU-210ENST00000527027 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 OR10J4P0C629 311 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 CSN1S1P47710 185 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 TIRAPP58753 221 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 LGALSLQ3ZCW2 172 aaPredicted RBP10.79□□□□□ -0.68
PTPRU-210ENST00000527027 Q6AWC8 147 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 EIF5AL1Q6IS14 154 aaKnown RBP10.79□□□□□ -0.68
PTPRU-210ENST00000527027 FAM159AQ6UWV7 190 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 OR4C5Q8NGB2 326 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 PSMG3Q9BT73 122 aaPredicted RBP10.79□□□□□ -0.68
PTPRU-210ENST00000527027 PAXXQ9BUH6 204 aa10.79□□□□□ -0.68
PTPRU-210ENST00000527027 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
PTPRU-210ENST00000527027 IBA57-AS1B1ANH7 110 aa10.78□□□□□ -0.68
PTPRU-210ENST00000527027 TPT1P13693 172 aaKnown RBP10.78□□□□□ -0.68
PTPRU-210ENST00000527027 Q8N814 137 aa10.78□□□□□ -0.68
PTPRU-210ENST00000527027 PHYHIPLQ96FC7 376 aa10.78□□□□□ -0.68
PTPRU-210ENST00000527027 ZNF471Q9BX82 626 aaPredicted RBP10.78□□□□□ -0.68
PTPRU-210ENST00000527027 FAM30AQ9NZY2 134 aa10.78□□□□□ -0.68
PTPRU-210ENST00000527027 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
PTPRU-210ENST00000527027 LOC100131303A0A0U1RQF7 123 aa10.77□□□□□ -0.69
PTPRU-210ENST00000527027 MBP02144 154 aa10.77□□□□□ -0.69
PTPRU-210ENST00000527027 RANP62826 216 aaKnown RBP10.77□□□□□ -0.69
PTPRU-210ENST00000527027 SERF2P84101 59 aa10.77□□□□□ -0.69
PTPRU-210ENST00000527027 LINC01556Q5JQF7 62 aa10.77□□□□□ -0.69
PTPRU-210ENST00000527027 SLC51BQ86UW2 128 aa10.77□□□□□ -0.69
PTPRU-210ENST00000527027 C9orf62Q8N4C0 152 aa10.77□□□□□ -0.69
PTPRU-210ENST00000527027 WFDC1Q9HC57 220 aa10.77□□□□□ -0.69
PTPRU-210ENST00000527027 M0R2P5 195 aa10.76□□□□□ -0.69
PTPRU-210ENST00000527027 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
PTPRU-210ENST00000527027 RPL7L1Q6DKI1 246 aaKnown RBP10.76□□□□□ -0.69
PTPRU-210ENST00000527027 NHLRC2Q8NBF2 726 aa10.76□□□□□ -0.69
PTPRU-210ENST00000527027 STOML3Q8TAV4 291 aa10.76□□□□□ -0.69
PTPRU-210ENST00000527027 BOLA1Q9Y3E2 137 aa10.76□□□□□ -0.69
PTPRU-210ENST00000527027 PPT1P50897 306 aa10.75□□□□□ -0.69
PTPRU-210ENST00000527027 HSD17B11Q8NBQ5 300 aa10.75□□□□□ -0.69
PTPRU-210ENST00000527027 OR2G3Q8NGZ4 309 aa10.75□□□□□ -0.69
PTPRU-210ENST00000527027 Q9HAA7 133 aa10.75□□□□□ -0.69
PTPRU-210ENST00000527027 CYTL1Q9NRR1 136 aa10.75□□□□□ -0.69
PTPRU-210ENST00000527027 TRAV8-6A0A0B4J262 113 aa10.74□□□□□ -0.69
PTPRU-210ENST00000527027 GNRH2O43555 120 aa10.74□□□□□ -0.69
PTPRU-210ENST00000527027 OR7C2O60412 319 aa10.74□□□□□ -0.69
PTPRU-210ENST00000527027 PLA2G1BP04054 148 aaKnown RBP10.74□□□□□ -0.69
PTPRU-210ENST00000527027 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
PTPRU-210ENST00000527027 SEC11BP0C7V7 166 aa10.74□□□□□ -0.69
PTPRU-210ENST00000527027 GATA1P15976 413 aaPredicted RBP10.74□□□□□ -0.69
PTPRU-210ENST00000527027 ATP6V0CP27449 155 aa10.74□□□□□ -0.69
PTPRU-210ENST00000527027 ACOT6Q3I5F7 207 aaPredicted RBP10.74□□□□□ -0.69
PTPRU-210ENST00000527027 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
PTPRU-210ENST00000527027 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
PTPRU-210ENST00000527027 KRTAP29-1A8MX34 341 aaPredicted RBP10.73□□□□□ -0.69
PTPRU-210ENST00000527027 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
PTPRU-210ENST00000527027 OR10J3Q5JRS4 329 aa10.73□□□□□ -0.69
PTPRU-210ENST00000527027 TMED6Q8WW62 240 aa10.73□□□□□ -0.69
PTPRU-210ENST00000527027 UMAD1C9J7I0 102 aa10.72□□□□□ -0.69
PTPRU-210ENST00000527027 FFAR4Q5NUL3 377 aa10.72□□□□□ -0.69
PTPRU-210ENST00000527027 IGHV3-30P01768 117 aa10.71□□□□□ -0.69
PTPRU-210ENST00000527027 IGHV3-33P01772 117 aa10.71□□□□□ -0.69
PTPRU-210ENST00000527027 IGHV3-30-3P0DP02 117 aa10.71□□□□□ -0.69
PTPRU-210ENST00000527027 IGHV3-30-5P0DP03 117 aa10.71□□□□□ -0.69
PTPRU-210ENST00000527027 RAB5CP51148 216 aa10.71□□□□□ -0.69
PTPRU-210ENST00000527027 NKX2-5P52952 324 aaPredicted RBP10.71□□□□□ -0.69
PTPRU-210ENST00000527027 UBE2L3P68036 154 aaKnown RBP10.71□□□□□ -0.69
PTPRU-210ENST00000527027 AKR1C8PQ5T2L2 129 aa10.71□□□□□ -0.69
PTPRU-210ENST00000527027 SLC25A29Q8N8R3 303 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms