RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 CXCL1P09341 107 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 HTN1P15515 57 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 PYGO2Q9BRQ0 406 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 KLF12Q9Y4X4 402 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
SMPD1-202ENST00000526280 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 RPS10P46783 165 aaKnown RBP9.27□□□□□ -0.93
SMPD1-202ENST00000526280 EMP1P54849 157 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 Q6AWC8 147 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 Q6ZQT7 251 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 PRNTQ86SH4 94 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 ANAPC16Q96DE5 110 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 NDFIP1Q9BT67 221 aa9.27□□□□□ -0.93
SMPD1-202ENST00000526280 SCO2A0A1W2PP80 73 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 PLAC8L1A1L4L8 177 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
SMPD1-202ENST00000526280 SAPCD1Q5SSQ6 148 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 ZNF493Q6ZR52 646 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
SMPD1-202ENST00000526280 TMEM263Q8WUH6 116 aaKnown RBP9.26□□□□□ -0.93
SMPD1-202ENST00000526280 C11orf52Q96A22 123 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 FMC1Q96HJ9 113 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 FAM210BQ96KR6 192 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 CELA1Q9UNI1 258 aa9.26□□□□□ -0.93
SMPD1-202ENST00000526280 TRBV6-1A0A0K0K1D8 114 aa9.25□□□□□ -0.93
SMPD1-202ENST00000526280 PFN1P07737 140 aaKnown RBP9.25□□□□□ -0.93
SMPD1-202ENST00000526280 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
SMPD1-202ENST00000526280 Q86TA4 180 aa9.25□□□□□ -0.93
SMPD1-202ENST00000526280 C16orf74Q96GX8 76 aa9.25□□□□□ -0.93
SMPD1-202ENST00000526280 C8orf49Q96NF6 230 aa9.25□□□□□ -0.93
SMPD1-202ENST00000526280 DKK2Q9UBU2 259 aa9.25□□□□□ -0.93
SMPD1-202ENST00000526280 CSMD3Q7Z407 3707 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 TRBV24-1A0A075B6N3 115 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 IGHV1OR15-1A0A075B7D0 117 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 S100A6P06703 90 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 S100PP25815 95 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
SMPD1-202ENST00000526280 TMEM183BQ1AE95 376 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 ANXA2RQ3ZCQ2 193 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 CASC10Q5T4H9 136 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 FAM222AQ5U5X8 452 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 ZFAND6Q6FIF0 208 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 LINC01551Q86U37 167 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 DERL1Q9BUN8 251 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 ZFP30Q9Y2G7 519 aa9.24□□□□□ -0.93
SMPD1-202ENST00000526280 TEX48A0A1B0GUV7 120 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 CBY3A6NI87 242 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 LYRM9A8MSI8 78 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 PPP1R2P9O14990 202 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 GCGP01275 180 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 S100A9P06702 114 aaKnown RBP9.23□□□□□ -0.93
SMPD1-202ENST00000526280 ZNF80P51504 273 aaPredicted RBP9.23□□□□□ -0.93
SMPD1-202ENST00000526280 UBE2G1P62253 170 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 C12orf74Q32Q52 190 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 COX8CQ7Z4L0 72 aa9.23□□□□□ -0.93
SMPD1-202ENST00000526280 TIMM8BQ9Y5J9 83 aaPredicted RBP9.23□□□□□ -0.93
SMPD1-202ENST00000526280 C9JCJ5 164 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 LTAP01374 205 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 RPL35P42766 123 aaKnown RBP9.22□□□□□ -0.93
SMPD1-202ENST00000526280 AKR1D1P51857 326 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 TDRG1Q3Y452 100 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 FAM159AQ6UWV7 190 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 C11orf72Q8NBR9 251 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 OCC1Q8TAD7 63 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 PHLDA1Q8WV24 401 aaPredicted RBP9.22□□□□□ -0.93
SMPD1-202ENST00000526280 TP53TG3Q9ULZ0 132 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 LY96Q9Y6Y9 160 aa9.22□□□□□ -0.93
SMPD1-202ENST00000526280 DYNC2H1Q8NCM8 4307 aaKnown RBP9.21□□□□□ -0.93
SMPD1-202ENST00000526280 DAZ2Q13117 558 aaKnown RBP9.21□□□□□ -0.94
SMPD1-202ENST00000526280 Q6ZTC4 211 aa9.21□□□□□ -0.94
SMPD1-202ENST00000526280 NOP10Q9NPE3 64 aaKnown RBP9.21□□□□□ -0.94
SMPD1-202ENST00000526280 STARD9Q9P2P6 4700 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 TRBV20OR9-2A0A075B6H5 130 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 PGPEP1LA6NFU8 196 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 SNURFLB1AK76 121 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 IBA57Q5T440 356 aaKnown RBP9.2□□□□□ -0.94
SMPD1-202ENST00000526280 CEMP1Q6PRD7 247 aaPredicted RBP9.2□□□□□ -0.94
SMPD1-202ENST00000526280 TMEM183AQ8IXX5 376 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 LINC00518Q8N0U6 118 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 OR10G8Q8NGN5 311 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 ZC2HC1AQ96GY0 325 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 IMMP2LQ96T52 175 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 GSN-AS1Q9NRJ2 163 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 C11orf21Q9P2W6 132 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 NAGKQ9UJ70 344 aa9.2□□□□□ -0.94
SMPD1-202ENST00000526280 NUPR2A6NF83 97 aa9.19□□□□□ -0.94
SMPD1-202ENST00000526280 FABP5P3A8MUU1 101 aa9.19□□□□□ -0.94
SMPD1-202ENST00000526280 TRGC2P03986 189 aa9.19□□□□□ -0.94
SMPD1-202ENST00000526280 CRIP1P50238 77 aa9.19□□□□□ -0.94
SMPD1-202ENST00000526280 TCL1AP56279 114 aa9.19□□□□□ -0.94
SMPD1-202ENST00000526280 DAD1P61803 113 aa9.19□□□□□ -0.94
SMPD1-202ENST00000526280 KCNIP4Q6PIL6 250 aa9.19□□□□□ -0.94
SMPD1-202ENST00000526280 BAGE2Q86Y30 109 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms