RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 SPANXN1Q5VSR9 72 aa4.12□□□□□ -1.75
CLINT1-208ENST00000524306 UNQ9165/PRO28630Q6UXU0 137 aa4.12□□□□□ -1.75
CLINT1-208ENST00000524306 TMEM219Q86XT9 240 aa4.12□□□□□ -1.75
CLINT1-208ENST00000524306 LINC01356Q8N9X3 169 aa4.12□□□□□ -1.75
CLINT1-208ENST00000524306 TOMM6Q96B49 74 aa4.12□□□□□ -1.75
CLINT1-208ENST00000524306 EDA2RQ9HAV5 297 aa4.12□□□□□ -1.75
CLINT1-208ENST00000524306 IGHV4-30-2A0A087WSY4 118 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 SMIM17P0DL12 118 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 PRR9Q5T870 116 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 RHPN1-AS1Q9BWJ2 59 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 IGHV3-35A0A0C4DH35 117 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 MUC21A0A0G2JKD1 596 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 TRBV6-5A0A0K0K1A5 114 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 MUC21A0A140T8X8 626 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 C9orf118A6NHY6 69 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 CBY3A6NI87 242 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 A8MTW9 85 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 SMKR1H3BMG3 65 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 PIK3CD-AS1Q5SR53 167 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 MUC21Q5SSG8 566 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 GTF2H5Q6ZYL4 71 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 DCANP1Q8TF63 244 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 TMEM158Q8WZ71 300 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 PTH2Q96A98 100 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 AP1S3Q96PC3 154 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 CSTL1Q9H114 145 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 KIF25-AS1Q9Y6Z4 181 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 ELANEP08246 267 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 COX6B1P14854 86 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 SUMO2P61956 95 aaKnown RBP4.11□□□□□ -1.75
CLINT1-208ENST00000524306 RNF151Q2KHN1 245 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 PRR31Q5SQ13 230 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 Q8N2B8 174 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 TM2D2Q9BX73 214 aa4.11□□□□□ -1.75
CLINT1-208ENST00000524306 HRNRQ86YZ3 2850 aaPredicted RBP4.1□□□□□ -1.75
CLINT1-208ENST00000524306 IGHV3OR16-8A0A075B7F1 116 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 IGHV3-66A0A0C4DH42 116 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 RNF223E7ERA6 249 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 H7C1H1 209 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 TRBV12-3P01733 135 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 RNASE3P12724 160 aaKnown RBP4.1□□□□□ -1.75
CLINT1-208ENST00000524306 BRD3OSQ6XYD6 125 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 RASL10AQ92737 203 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 C9orf85Q96MD7 179 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 DKK2Q9UBU2 259 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 ASPMQ8IZT6 3477 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 F8VRH5 84 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 H3BVH4 76 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 PF4V1P10720 104 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 LINC00315P59091 139 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 ANXA2RQ3ZCQ2 193 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 PAPPA-AS1Q5QFB9 102 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 UFSP1Q6NVU6 142 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 NEXN-AS1Q8NBZ9 246 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 WFDC12Q8WWY7 111 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 KLK15Q9H2R5 256 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 COL6A6A6NMZ7 2263 aa4.1□□□□□ -1.75
CLINT1-208ENST00000524306 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.09□□□□□ -1.75
CLINT1-208ENST00000524306 ZNF207O43670 478 aaKnown RBP4.09□□□□□ -1.75
CLINT1-208ENST00000524306 DUSP14O95147 198 aaKnown RBP4.09□□□□□ -1.75
CLINT1-208ENST00000524306 GAS8-AS1O95177 125 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 ZNF256Q9Y2P7 627 aaPredicted RBP4.09□□□□□ -1.75
CLINT1-208ENST00000524306 PHLDA3Q9Y5J5 127 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 ARHGAP32A7KAX9 2087 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 PIEZO1Q92508 2521 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 ROS1P08922 2347 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 PCNX1Q96RV3 2341 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 KALRNO60229 2985 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 K7EQG2 157 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 PRSS1P07477 247 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 LGALS1P09382 135 aaKnown RBP4.09□□□□□ -1.75
CLINT1-208ENST00000524306 RIPPLY3P57055 190 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 BLCAPP62952 87 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 Q6YL49 198 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 ERASQ7Z444 233 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 OR5A1Q8NGJ0 315 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 TMEM141Q96I45 108 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 UBE2E2Q96LR5 201 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 BBC3Q96PG8 261 aaPredicted RBP4.09□□□□□ -1.75
CLINT1-208ENST00000524306 JMJD8Q96S16 334 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 LINC00467Q9BRT7 94 aa4.09□□□□□ -1.75
CLINT1-208ENST00000524306 MCRIP2Q9BUT9 160 aaKnown RBP4.09□□□□□ -1.75
CLINT1-208ENST00000524306 H0Y8G0 127 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 SCGB1A1P11684 91 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 GATA1P15976 413 aaPredicted RBP4.08□□□□□ -1.76
CLINT1-208ENST00000524306 POLR2KP53803 58 aaKnown RBP4.08□□□□□ -1.76
CLINT1-208ENST00000524306 TMEM86BQ8N661 226 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 CLUHP3Q96NS8 147 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 TIMM17AQ99595 171 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 FOXC2Q99958 501 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 VPREB3Q9UKI3 123 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 IGHV3OR16-13A0A075B7E8 117 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 IGHV3-49A0A0A0MS15 119 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 IGHV3-74A0A0B4J1X5 117 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 A0A0J9YX75 114 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 TRBV27A0A0K0K1C4 114 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 A0A1B0GWB2 263 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 GAGE12BA1L429 117 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 AVPP01185 164 aa4.08□□□□□ -1.76
CLINT1-208ENST00000524306 S100A4P26447 101 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms